Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00290 ATGACAATTGAGACTCTTGCACCAAAGTCAGAGAATAGGAAAACAAGGAAGAACAAGGAAGTTGTTGATGAGAATGCACCTTTGATACCTAAGCCTCAAGAAGCAGATGCTGAGTTTCACGAATTCAATGGAGCTTCGTTTTCTGGTGCTGTTTTCAATTTGTCCACAACAATTATTGGGGCTGGAATCATGGGTTTACCGGCTTGCGTTAAAAAGTTAGGGCTGGTGCCTGGTCTTCTTGCCATATTTCTAGCAGCATTATTGACAGAGAAGTCAATTGAGTTCATGATCAGGTTTTCTAGGGCAGGAAATCTGTCTTCCTATGGAAGTCTTATGGAAGATGCCTTTGGGAGATACGGAAAAGCACTAGTGGAGTTTTGTGTTGTAATCAATAACATTGGTGTTCTGACTGTTTACATGATTATTATTGGTGATGTGATTTCTGGAACAACTTCAAGTGGAATTCACCATCCTGGTATCCTTGAAGGATGGTTTGGTGTCCATTGGTGGACTGGACGTGCAATTGTTCTTGTTGTTACAACACTATCTGTGTTTGCACCTTTGGTCAGCTTTAAGCGAATTGATTCATTGAGATTCACATCTGCATTGTCAGTTGGATTAGCAGTTGTTTTCCTTGTCATTGCTGTGGGGATCTCAATTATCAAGATTATAAGTGGAGGCATCGGGATGCCGAGACTCTTCCCGATCATTACTGATGCTGATTCAGTTTTTGATCTATTTACGGTAGTTCCTGTGCTGGTGAATGCTTACATCTGTCACTACAATGTTCACAGCATAGATAATGAACTCGATGATTCCTCATGGATGCACGGGGTTGTGCGTACATCCCTTACTCTATGCTCTTCAGTGTACTTACTAACAAGCTTCTTTGGGTTCCTCCTATTTGGTGACGAAACTCTCGATGACGTGCTTGCCAATTTTGATACTGATCTTGGAATTCCTTTTGGTTCTGCGCTCAATGATGCCATTCGTTTTAGCTATGCTGCGCATCTTATGCTTGTATTTCCTGTAGTCTTCTATGCAGTGAGGATCAACATAGATGGTCTCATATTTTCCTCATCAAGTCCTTTGGTTGTTGATAACTTCAGATTTGCCTCAATTACTATTGCCCTTGTTGGTATTATCTTCACGGGAGCAAATTTCATACCTAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACAGCTGCTGTTTGTGTAGGATTCATATTTCCAGCGGCAATCACACTTAGGGATCAATACAATATAGCAACTAAAACAGACAGAATTCTATCTATCTTTATGATAGTCCTGGCAGTCTTCTCAAGCGTTGTGGCTATATACAGTGATGCCTATGCCTTGATCAAGAAGAATACATCTAAAGGTGAATAA 1392 0.408 MTIETLAPKSENRKTRKNKEVVDENAPLIPKPQEADAEFHEFNGASFSGAVFNLSTTIIGAGIMGLPACVKKLGLVPGLLAIFLAALLTEKSIEFMIRFSRAGNLSSYGSLMEDAFGRYGKALVEFCVVINNIGVLTVYMIIIGDVISGTTSSGIHHPGILEGWFGVHWWTGRAIVLVVTTLSVFAPLVSFKRIDSLRFTSALSVGLAVVFLVIAVGISIIKIISGGIGMPRLFPIITDADSVFDLFTVVPVLVNAYICHYNVHSIDNELDDSSWMHGVVRTSLTLCSSVYLLTSFFGFLLFGDETLDDVLANFDTDLGIPFGSALNDAIRFSYAAHLMLVFPVVFYAVRINIDGLIFSSSSPLVVDNFRFASITIALVGIIFTGANFIPSIWDIFQFTGATAAVCVGFIFPAAITLRDQYNIATKTDRILSIFMIVLAVFSSVVAIYSDAYALIKKNTSKGE 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00290 463 Pfam Transmembrane amino acid transporter protein 45 449 IPR013057 -
Car02g00290 463 PANTHER AMINO ACID TRANSPORTER 7 458 - -
Car02g00290 463 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 458 - -
Car02g00290 463 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00290 Car-Chr2 3069890 3074999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00290 20 459 Amino Acid or Auxin Permease AAAP Family AT5G38820 66.517 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00290 K14207 - gmx:100791286 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00290 02 3069890 3074999 Car02g00290 02 3069890 3074999 ECH
Car02g00290 02 3069890 3074999 Car03g00298 03 6888332 6893283 PCT