Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00284 ATGTCGTGTTCTTCTTCATCTGGGTCGGAAGATGACGATGAGGGCTTCGATTCTTACCGGAAAGGTGGTTACCACGCCGTCAGGGTCGGAGATCAGTTCGCCGGCGGCAGGTACATAGCTCAGAGGAAATTGGGTTGGGGTCAATTTTCAACCGTTTGGCTTGCTTATGATACTACAACCTCTGCTTATGTTGCTCTCAAGATCCAGAAAAGTGCGGCTCAGTTTGTTCAGGCAGCCCTTCACGAGATAGATGTTCTTTCATCCATTGTTGACGGCGCCATTTCAGATTCAAAATTTGTTGTTCAATTGATTGACCACTTTAAGCACACGGGCCCTAATGGCCAGCACCAGTGCATGGTACTCGAGTTTCTCGGAGATAGCCTTCTTCGTTTAGTCAAATACAACCGTTACAAAGGCCTTCCAATGAATAAAGTTAGGGAGATGTGCAAATGCATTTTGATCGGTTTGGATTACTTGCATAGAGAACATGGTATTATCCACACAGACCTAAAACTCGAAAATGTTCTTTTGGCTTCTACCATTGATCCTGCCAAAGACCCTGTTCGATCTGGAATCTCCCCGATTTTAGAGAGGCCTGAGGGAAACATAAACGGCACGGTTACAAGTCTTATCGAGAAAAAGTTGAAAAGGAGAGCAAGGAGGGCGGTAGCTAAAATATCCGGACAAAGAGCTTCAATGGGAGGAATGGGAGAAGCTCCAAAACCGGGGAGAAACATTGATGGGATCGATGTGAGATGCAAAGTGGTAGATTTTGGAAATGCGTGTTGGGCTGATAAGCAATTTGCAGAAGAAATTCAGACAAGACAGTACAGAGCTCCTGAAGTTATATTGCAGGCCGGTTATTCTTTCTCCGTTGACATGTGGTCGTTTGCTTGTATTGCTTTCGAGCTTGCCACTGGTGATATGTTGTTTACGCCCAAAGTCGGACAAGGTTTTAGTGAGGATGAGGACCACCTTGCCCTGATGATGGAACTCCTCGGAAAGATGCCGCGGAAGGTAGTAAGTACACTCTCACACTGTCTGTGTATTTATTTATATAACTAA 1065 0.4526 MSCSSSSGSEDDDEGFDSYRKGGYHAVRVGDQFAGGRYIAQRKLGWGQFSTVWLAYDTTTSAYVALKIQKSAAQFVQAALHEIDVLSSIVDGAISDSKFVVQLIDHFKHTGPNGQHQCMVLEFLGDSLLRLVKYNRYKGLPMNKVREMCKCILIGLDYLHREHGIIHTDLKLENVLLASTIDPAKDPVRSGISPILERPEGNINGTVTSLIEKKLKRRARRAVAKISGQRASMGGMGEAPKPGRNIDGIDVRCKVVDFGNACWADKQFAEEIQTRQYRAPEVILQAGYSFSVDMWSFACIAFELATGDMLFTPKVGQGFSEDEDHLALMMELLGKMPRKVVSTLSHCLCIYLYN 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00284 354 ProSiteProfiles Protein kinase domain profile. 38 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00284 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Car02g00284 354 SMART serkin_6 38 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00284 354 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Car02g00284 354 Pfam Protein kinase domain 39 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00284 354 Pfam Protein kinase domain 252 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00284 354 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 7 342 - -
Car02g00284 354 PANTHER OS07G0472400 PROTEIN 7 342 - -
Car02g00284 354 CDD STKc_SRPK 27 342 - -
Car02g00284 354 Gene3D Phosphorylase Kinase; domain 1 14 119 - -
Car02g00284 354 Gene3D Transferase(Phosphotransferase) domain 1 120 350 - -
Car02g00284 354 SUPERFAMILY Protein kinase-like (PK-like) 32 350 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00284 Car-Chr2 2962712 2966356 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00284 4 341 EF-hand Containing Proteins AT5G22840 49.231 1.33e-128 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Car02g00284 Pkinase 7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00284 K08832 - gmx:100811724 600.897