Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00283 ATGGTTCGTCAAACTGATTTAGTTATCATCGGTGTCTCTGTTGGTTTGGCCCTTGGAATTCTGATTTGTTGCCTCATATTTTTTGGCATAAGGTGGTACAAGAAACGTTCTCATCTTACACGATCTGATAGTGAGCCTAGTTTAACAACTCTCCCGATACGAACGAATGGACTTGAAACAAGTAATGACTTTAGTGCATCCATCTCTAGTTCCGTAGCAACATCAAGGTCACAAAATGTACAGAAAAATTCCCATTTCACTTGGTGGAATCATCAAAACAAAGACCGATTTGCTTCAACATCAGGCATTCTCAAGTATTCGTATAAAGAACTTCAAAAGGCCACACAAAATTTCACGACTACCTTGGGAGAAGGATCGTTTGGTACGGTTTATAAAGCCACAATGCCTACAGGAGAGGTGGTGGCTGTGAAGGTGCTAGCACCCAATTCAAAACAAGGGGAGAGAGAATTCCAAACAGAGGTGTCTCTGCTAGGAAGACTGCATCACCGGAATCTTGTGAATTTGCTTGGATATTGTGTAGATAAAGGACAACGCATATTGGTTTATCAGTTCATGAGCAATGGAAGCTTAGCAGCTATTTTATATGGTGAAGAAAAGAAGTTAAGTTGGGATGAAAGGCTTCAAATTGCAATTGATATTTCACATGGAATAGAGTATCTTCATGAAGGAGCAGTCCCGCCCGTCATACATCGTGATTTGAAATCTCCCAACATATTGCTAGATGACTCTATGAGAGCTAAGGTTGCTGATTTTGGCCTCTCCAAGGAAGAGATCTTTGATGGCCGAAATTCGGGTCTTAAAGGTACATATGGTTACATGGACCCTGCATACATTTCCACAAGCAAGTTAACAACCAAGAGTGACATATACAGTTTTGGTATCATACTTTTTGAACTAATCACTGCCATCCATCCACATCAAAATTTGATGGAATATATTAACCTTGCTTCAATGGAACATGATGGTATAGATGAGATACTTGACAAGCCACTTGTTGGAAAATGCAATGTTGTAGAAGTGAGGCAACTTGCTAAAATTGCACACAAATGCTTGCACAAATCACCCAAGAAACGACCCTCGATAGGCGAAGTTTCACAAGTTATATCAAGGATAAAGCAAAGGAGATTGCGCCATATGATGGAAGATAACTTGTCATTTGCAAATAGTAATAACTTTTCAAGAGCTGCAAGTCGATTAGAAGAACGACTTGAATTAAGCAGGATTGTTACCATGAGCATCAAAGAAACTGTATGA 1275 0.3961 MVRQTDLVIIGVSVGLALGILICCLIFFGIRWYKKRSHLTRSDSEPSLTTLPIRTNGLETSNDFSASISSSVATSRSQNVQKNSHFTWWNHQNKDRFASTSGILKYSYKELQKATQNFTTTLGEGSFGTVYKATMPTGEVVAVKVLAPNSKQGEREFQTEVSLLGRLHHRNLVNLLGYCVDKGQRILVYQFMSNGSLAAILYGEEKKLSWDERLQIAIDISHGIEYLHEGAVPPVIHRDLKSPNILLDDSMRAKVADFGLSKEEIFDGRNSGLKGTYGYMDPAYISTSKLTTKSDIYSFGIILFELITAIHPHQNLMEYINLASMEHDGIDEILDKPLVGKCNVVEVRQLAKIAHKCLHKSPKKRPSIGEVSQVISRIKQRRLRHMMEDNLSFANSNNFSRAASRLEERLELSRIVTMSIKETV 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00283 424 Gene3D Phosphorylase Kinase; domain 1 76 191 - -
Car02g00283 424 SUPERFAMILY Protein kinase-like (PK-like) 87 373 IPR011009 -
Car02g00283 424 SMART serkin_6 116 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00283 424 PANTHER OS01G0750732 PROTEIN 9 418 - -
Car02g00283 424 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 2 9 418 - -
Car02g00283 424 ProSiteProfiles Protein kinase domain profile. 116 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00283 424 CDD STKc_IRAK 122 378 - -
Car02g00283 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Car02g00283 424 Gene3D Transferase(Phosphotransferase) domain 1 192 401 - -
Car02g00283 424 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Car02g00283 424 Pfam Protein tyrosine and serine/threonine kinase 118 373 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00283 Car-Chr2 2939898 2942798 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00283 78 380 Receptor kinase-like Gene Family AT1G79620 41.824 2.05e-70 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Car02g00283 PK_Tyr_Ser-Thr 2.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00283 - - gmx:100819995 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00283 02 2939898 2942798 Car02g00283 02 2939898 2942798 ECH