Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00272 ATGAGGCTTGTTATTTTATCTCTTTGTGTTCTTGTTCTATTCTCTTATTCAGTTGCTTATGATCCATTGGATCCAAATGGAAACATAACAATCAAATGGGATGTTATGTCTTGGACACCAGATGGATATGTGGCGACGGTAACAATCAACAATTTCCAAATGTTTCGACACATCATGAATCCGGGATGGACTTTAGGATGGACATGGGCCAAAAAAGAAGTTATATGGTCAATGGTAGGAGCTCAAACAACAGAACAAGGTGATTGTTCAAAGTTCAAAGGCAACATACCTCATTGCTGCAAGAAAATTCCAACAGTTGTAGACTTGTTACCTGGTGTACCTTACAATCAACAATTCTCAAACTGCTGTAAAGGTGGAGTTGTTGCAGCATGGGGACAAGATCCTACACAATCTATATCAGCATTTCAAGTTAGTGTAGGACAAGCTGGTACTTCTAACAGAACAGTTAAACTTCCAAAGAATTTCACTCTTTTGGCTCCTGGACCTGGATATACTTGTGGACCTGCTAAGGTTGTTCCTTCTACAAATTTCCTTACGCCGGATAAGCGCCGCAAGACTCAAGCATTGAGTAAGAGTGACTCAAAAATTCTGAGTATGGTAGGGGTTCACACTCCAAAGAAAGACAATGAACCATTGATGCAATGCACTCATCATATGTGTCCTATTAGGGTTCATTGGCATGTGAAGGTCAACTATAAAGACTATTGGAGAGTCAAGATTGCTGTGACAAATTTCAATTACAGGATGAATTACTCTCTTTGGAGTCTTGCTATTCAGCATCCAAATCTTAACAATGTCACACAAGTTTTCAGCTTTAATTACAAGCCACTTCTTCCCTATGAGTCCATAAATGACACTGGAATGTTCTTTGGAATGAAATACTTCAATGATCTACTAATGGAAGCTGGACCAGCTGGAAATATTCAATCAGAAGTCCTTCTTCAAAAAGACAAAGAAACATTCACATTCAAACAAGGATGGGCATTTCCTCACAAGGTTTACTTTAATGGTGATGAATGCATGTTACCTCCACCTGATACCTACCCTTTTCTTCCTAATTCTTCCCCTAAAAGCTTAATTACATTCAAGTCACTCATCTTCTCATTGATTTTGCTGTTAGTAGTTTGGTGA 1152 0.3863 MRLVILSLCVLVLFSYSVAYDPLDPNGNITIKWDVMSWTPDGYVATVTINNFQMFRHIMNPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNIPHCCKKIPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPTQSISAFQVSVGQAGTSNRTVKLPKNFTLLAPGPGYTCGPAKVVPSTNFLTPDKRRKTQALSKSDSKILSMVGVHTPKKDNEPLMQCTHHMCPIRVHWHVKVNYKDYWRVKIAVTNFNYRMNYSLWSLAIQHPNLNNVTQVFSFNYKPLLPYESINDTGMFFGMKYFNDLLMEAGPAGNIQSEVLLQKDKETFTFKQGWAFPHKVYFNGDECMLPPPDTYPFLPNSSPKSLITFKSLIFSLILLLVVW 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00272 383 Pfam COBRA-like protein 43 198 IPR006918 GO:0010215|GO:0031225
Car02g00272 383 PANTHER PROTEIN COBRA 5 196 IPR006918 GO:0010215|GO:0031225
Car02g00272 383 PANTHER PROTEIN COBRA 198 381 IPR006918 GO:0010215|GO:0031225
Car02g00272 383 PANTHER COBRA-LIKE PROTEIN 5 196 - -
Car02g00272 383 PANTHER COBRA-LIKE PROTEIN 198 381 - -
Car02g00272 383 PIRSF COBRA 1 203 IPR006918 GO:0010215|GO:0031225
Car02g00272 383 PIRSF COBRA 196 383 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00272 Car-Chr2 2760961 2763926 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00272 19 382 COBRA Gene Family AT3G29810 57.971 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00272 - - gmx:100798678 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00272 02 2760961 2763926 Car02g00272 02 2760961 2763926 ECH
Car02g00272 02 2760961 2763926 Car03g00241 03 5727868 5731384 ECH
Car02g00272 02 2760961 2763926 Car03g00240 03 5723560 5727466 PCT
Car03g00241 03 5727868 5731384 Car02g00272 02 2760961 2763926 PCT