Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00271 ATGGATTTTGTTGTACATACCACTTTCATCAGATGCCAACTGTACACAACAATACACTCTGACTCACCTTCTATTTCTCTCTCTAACATTTTCTCTCTCCTATGTCCTTTGTATTTACTTCTTTATTTGTTTTTCATTTCACTTATAGTGTTCTTATTGTCAGACTACAACAATTCTGTGAGAGACAAAAACAAAAATAAAAAAATTATGTTTTCCCCTTTCCTTAAACCTTGTCCATGCATTCTTCTCTTCCTCTTGTTCACGTTGTTTTACACTTCAACAGAAGCTTATGATCCACTCGACCCAAATGGAAATATCACAATCAAATGGGATATTATTAGCTGGACACAAGATGGTTATGTTGCTGTTGTTACGTTGAACAACTACCAACAATATCGTCATATATCGCCGCCCGGATGGTCATTAGGGTGGACATGGGCTAAGAAGGAGGTAATATGGAACATAGTAGGAGGGCAGACCACTGAACAAGGAGATTGTTCAAGATTTAAATCCAGTCCCCCTCCACATTGTTGTAAAAAAGATCCAACGGTTGTCGATTTACTTCCCGGAACACCTTATAATCAACAAATCGCAAATTGCTGCAGAGGTGGTGTACTCAGCTCACTGGCACAGGATCCAACAAATGCTGTTTCAGCATTTCAAGTCAGCGTCGGTAGCTCTGGCACCACTAACAAAACTGTCAAACTGCCGCAAAATTTCACCCTGAAAGCACCGGGACCAGGTTATACATGTGGACCGGCAAAAATTGTGAAACCTACTAAATTCAGAACACCTGACAAAAGGAGAGTGACTCAGGCACATATGACATGGAATGTGACATGCACATATTCACAATTTCTAGCTCAGAAAACTCCAACTTGCTGTGTTTCCCTCTCGGCTTTCTATAACGAAACTGTTGTTCCATGCCCGACATGTTCGTGTGGTTGCCAAGGAAACTCACCTCAATCAGGGAGCTGTGTAGATCCAAGTGCGCCGCATTTGGCCTCGGTTGTTTCGAGCCTCGGAAAGAATGGTATTACACCTTTGGTTCGATGTACTAGTCATATGTGTCCGATCCGAGTTCACTGGCACGTTAAGCTTAACTACAAGGAGTATTGGCGCGTGAAAGTCACTGTTACTAATTTCAATTACAGGATGAATTACTCAGATTGGAACTTGGTCATTCAACACCCGAACTTTGACAATCTGACGCAACTTTTCAGTTTCAACTACGATTCGATATCTCCCTACGGAACAATAAATGATACAGCAATGCTTTGGGGAGTTAAATTCTACAATGATTTTCTCATGCAAGCCGGTCCTCTTGGTAATGCACAATCCGAGCTACTTTTCCGAAAGGATAAATCAACTTTTACTTTCGATAAAGGTTGGGCCTTTCCTCGGAAGGTCTATTTCAACGGGGACAACTGCGTGATGCCACCACCGGATGCTTATCCATGGTCACCAAATTCCGCTGCCAAACAACAAGTTTCCTTCCTTGCTTTGACGATCGCCTTCTCGGTTGCCTTCGTACTTCACGCATATGCCTAA 1551 0.4223 MDFVVHTTFIRCQLYTTIHSDSPSISLSNIFSLLCPLYLLLYLFFISLIVFLLSDYNNSVRDKNKNKKIMFSPFLKPCPCILLFLLFTLFYTSTEAYDPLDPNGNITIKWDIISWTQDGYVAVVTLNNYQQYRHISPPGWSLGWTWAKKEVIWNIVGGQTTEQGDCSRFKSSPPPHCCKKDPTVVDLLPGTPYNQQIANCCRGGVLSSLAQDPTNAVSAFQVSVGSSGTTNKTVKLPQNFTLKAPGPGYTCGPAKIVKPTKFRTPDKRRVTQAHMTWNVTCTYSQFLAQKTPTCCVSLSAFYNETVVPCPTCSCGCQGNSPQSGSCVDPSAPHLASVVSSLGKNGITPLVRCTSHMCPIRVHWHVKLNYKEYWRVKVTVTNFNYRMNYSDWNLVIQHPNFDNLTQLFSFNYDSISPYGTINDTAMLWGVKFYNDFLMQAGPLGNAQSELLFRKDKSTFTFDKGWAFPRKVYFNGDNCVMPPPDAYPWSPNSAAKQQVSFLALTIAFSVAFVLHAYA 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00271 516 PANTHER COBRA-LIKE PROTEIN 76 515 - -
Car02g00271 516 PANTHER PROTEIN COBRA 76 515 IPR006918 GO:0010215|GO:0031225
Car02g00271 516 PIRSF COBRA 68 516 IPR006918 GO:0010215|GO:0031225
Car02g00271 516 Pfam COBRA-like protein 120 284 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00271 Car-Chr2 2754749 2760193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00271 82 514 COBRA Gene Family AT3G02210 71.659 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00271 - - gmx:100783820 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00271 02 2754749 2760193 Car02g00271 02 2754749 2760193 ECH
Car02g00271 02 2754749 2760193 Car03g00240 03 5723560 5727466 ECH
Car03g00240 03 5723560 5727466 Car02g00271 02 2754749 2760193 PCT