Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00264 ATGTATTCTCAGGAAGATTACACAGAAAAAGATTTGGATGAAAGGGCAGAAGAATTTATTCGTGACTTTAAGAGAATAGTGATGCGTGAAAatgaagtgttcttaagttttagaggagaagatactcgtgcatcattcacttcacatctctatgcttcatttcgaaatgaaggaatcaacgtttttagggatgatgattcgcttcgaagaggagatcaaatttcatataaaattgatctagcaatccaaggatctcaaattgctgttattgttttctcaagaaattacgccgattcgcggtggtgtttggatgagttggtgaagataatggaatgtcgaagaaccataggacaggtggtgcttccggtgttctacggtgtagatccatcggaagtTCGTCACCAAACTGGTGAATTTGGAATTGCGTTTCAAAGTTTGTTGAGTAGAATTTCAAAGAAGGAAGGAATTTATGATAGGTTTGGAAAAACAGTTAGATATGTTTTGAATAGTTTGTTAGTGTATAAAGAGGAATCATTGGATGAGGTGCTGACCTGGAGAGCTGCGCTTTGTGAGGCAGCCGGGCTTGCAGGATTTGTAGTACTAAATTCCAGgaacgaaacagaggctatcaagaatattgttggaaaagttacacgtttactagacaaggcagacttgttcgttgctaataatccagtgggagttgaacctcgagtgcaagaaatgattcgactgctaaacatccaacaatcaaatgatgttctaatattagggatgtggggcatgggaggaattggcaaaaccaccattgcgaaagccatatacaataaaattggccgcgattttgaaggtaggagcttccttgcaaatgttagggaagtttgggagcaaaatgctggacaagtgtccttacaagaacaacttctctatgatatttgccaagaaacaacaactaagatacaaaacattgaggcaggaaaaattatattaaaggatagactatgccgtaaaagagtacttcttgtacttgatgatgtgcatacattggatcaattgaatgctttatgtggaagtcgtcaatggtttggctcaggaagtagaatagttatcacaactagagatatgcatatacttagagggaatagagttgaccaaatatacacaatgaaagaaatgaatgaacgtgaatcaatcgagctttttagttggcatgcattcaagcaaccgaggcctagaaaagattttgataaactttccaaaactgtagttgagtattctgggaaattgcctctagctctggaagtccttgggtcatatctgtttgatagggggataacacagtggaagtgtgtattggacaaactcaaaagaattcccaatgaccatgtacagaagaagttaaaaataagctatgatggtttaaatgatgatactgagaaagaaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttatacatatattaaatggttgtgaactttatgcagaaattggaataaatgtccttgtggagcgaagtcttgtgaacgtagatgataggaacaggcttagaatgcatgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaaaggagcctggggagcgtagcaggttgtggtttagtaaggatgtgtttgatgtactatatgaacaaactggaacaaaagttgttgaaggactggctttggtgttgccaagagctaatgcaaaatgttttagtactaaagtatttaaaaagatgatgagactcagattgcttaatcttgccggagtacaacttgatggagattttgaatacctttcaagaaatctgagatggctttcatggaatggatttcctttagcatgcatacctacaagcttttatctaggaaatttagtttccattgagttagaaaacagcaatatcaaacttctgtggaaagagaaccagAGgctggagaagctgaaaattctcaatcttagtcattctcattatctaacacagaccccagacttttcaaacttgcctaatcttgaacaactagtactcactgattgtccaaggttgtcagaggtttcccatagtattggacatctcaataaagttcttctgataaatttggaagactgtattagccttcggagccttccaagaagtatctataagttaaaatctctgaaaacactcattctttctggttgtttaatgattgacaagttggaagaggacttggaacagatggaatctttaaccaccctgattgcaaataacactgcaataacaagagttcctttttcagtagtaaggtcaaaaaGCATTGGATATATTTCCTTGTGCGGCTATGAAGGATTCTCACGAGATGTGTTTCCATCTATCATTTGGTCTTGGATGTCACCAACAAATAATCCCCCATCCCAATTTCAAGCATCTACTGTCATGTCATCTCTTGTTCCTTTAGATGTACCACATAGTAATTCCCACGAACTATCATCAATTTCCACATACCTTCCAAGTCTTCGATGTCTTTGGGTGGAGTGCAGCTCAGAGCTTCAACTTTCTCATGATGCAGCAACAATTTTGGATGCCTTATATGCCTCAAATTGTAAGGAATTGGAACTAGCTGCAACTACATCACAAGTGTCAAGAAATTCCTTGAAATCTATTTTCATTCAAATGGGAATGAGTTGCCAAGTTGCCACTATTTTAAAAGAGAAAATTGTACAGAATATGACTGTCGAGGGGTGTGGTGGTTGTTTGTTCCCTGGTGATAGTTATCCAGATTGGTTAAACTTCAATTGCGAAGGTTCGTCTGTAACTTTTGAAGTCCCTCAAGTGGAAGGGCGTAACTTGAAGACAATGATGTGTATTGTCTATACTTCAACCCCAAATAACATTATATCAGATGGCCTTAAAAACTTGATGGTGAAAAATTTCACAAAGGCCACCATTCAGCTCTACAAGAGAGAGGCAGTAGCCGCCTTTGAAGATGAGGAGGGGCAGAGAGTAGTATCAAGTATAGAACCCGGTAACAAAGTGGAGGTTGTTGTTGTTTTTGAGAACGGTTTCATTGTGAAGAATACAATAGTTTATCTCATATATGACGAACCGATTGGCAAAAATATGGAGCAAAGTCATGCATCAAAGAAGAATGTTATTATTTGTAGTGGTGATGAAAATGAATGCGCTTTGGTGGATTGA 3240 0.1435 MYSQEDYTEKDLDERAEEFIRDFKRIVMRENEVFLSFRGEDTRASFTSHLYASFRNEGINVFRDDDSLRRGDQISYKIDLAIQGSQIAVIVFSRNYADSRWCLDELVKIMECRRTIGQVVLPVFYGVDPSEVRHQTGEFGIAFQSLLSRISKKEGIYDRFGKTVRYVLNSLLVYKEESLDEVLTWRAALCEAAGLAGFVVLNSRNETEAIKNIVGKVTRLLDKADLFVANNPVGVEPRVQEMIRLLNIQQSNDVLILGMWGMGGIGKTTIAKAIYNKIGRDFEGRSFLANVREVWEQNAGQVSLQEQLLYDICQETTTKIQNIEAGKIILKDRLCRKRVLLVLDDVHTLDQLNALCGSRQWFGSGSRIVITTRDMHILRGNRVDQIYTMKEMNERESIELFSWHAFKQPRPRKDFDKLSKTVVEYSGKLPLALEVLGSYLFDRGITQWKCVLDKLKRIPNDHVQKKLKISYDGLNDDTEKEIFLDIACFFIGMDRNDVIHILNGCELYAEIGINVLVERSLVNVDDRNRLRMHDLLRDMGREIIREKSPKEPGERSRLWFSKDVFDVLYEQTGTKVVEGLALVLPRANAKCFSTKVFKKMMRLRLLNLAGVQLDGDFEYLSRNLRWLSWNGFPLACIPTSFYLGNLVSIELENSNIKLLWKENQRLEKLKILNLSHSHYLTQTPDFSNLPNLEQLVLTDCPRLSEVSHSIGHLNKVLLINLEDCISLRSLPRSIYKLKSLKTLILSGCLMIDKLEEDLEQMESLTTLIANNTAITRVPFSVVRSKSIGYISLCGYEGFSRDVFPSIIWSWMSPTNNPPSQFQASTVMSSLVPLDVPHSNSHELSSISTYLPSLRCLWVECSSELQLSHDAATILDALYASNCKELELAATTSQVSRNSLKSIFIQMGMSCQVATILKEKIVQNMTVEGCGGCLFPGDSYPDWLNFNCEGSSVTFEVPQVEGRNLKTMMCIVYTSTPNNIISDGLKNLMVKNFTKATIQLYKREAVAAFEDEEGQRVVSSIEPGNKVEVVVVFENGFIVKNTIVYLIYDEPIGKNMEQSHASKKNVIICSGDENECALVD 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00264 1079 Pfam TIR domain 33 152 IPR000157 GO:0007165
Car02g00264 1079 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 37 1047 IPR044974 GO:0006952
Car02g00264 1079 CDD AAA 233 386 - -
Car02g00264 1079 Gene3D Ribonuclease Inhibitor 580 927 IPR032675 -
Car02g00264 1079 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 37 1047 - -
Car02g00264 1079 Gene3D - 220 386 IPR027417 -
Car02g00264 1079 SUPERFAMILY "Winged helix" DNA-binding domain 462 568 IPR036390 -
Car02g00264 1079 ProSiteProfiles TIR domain profile. 29 171 IPR000157 GO:0007165
Car02g00264 1079 PRINTS Disease resistance protein signature 426 440 - -
Car02g00264 1079 PRINTS Disease resistance protein signature 664 680 - -
Car02g00264 1079 PRINTS Disease resistance protein signature 256 271 - -
Car02g00264 1079 PRINTS Disease resistance protein signature 333 347 - -
Car02g00264 1079 SMART till_3 30 171 IPR000157 GO:0007165
Car02g00264 1079 Gene3D - 29 219 IPR035897 -
Car02g00264 1079 Coils Coil 751 771 - -
Car02g00264 1079 Gene3D - 391 475 IPR042197 -
Car02g00264 1079 SUPERFAMILY Toll/Interleukin receptor TIR domain 31 169 IPR035897 -
Car02g00264 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 226 486 IPR027417 -
Car02g00264 1079 SUPERFAMILY L domain-like 548 902 - -
Car02g00264 1079 Pfam NB-ARC domain 239 471 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00264 Car-Chr2 2643239 2650260 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00264 38 781 WRKY Transcription Factor Family AT4G12020 31.711 5.93e-87 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00264 - - cam:101494533 2137.84