Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00263 ATGTCTTCCTCTAATAATTTTACAAAAAAGACAAGATCAAGAGCAATAAATCCCCGAAGAAGATATCTAAGATCCCAAAAAAGTATTtatgaagtgttcttaagtttcagaggggaagacactcgtgcttccttcatttcacatctctatgcttctcttcaaaacgaagcaattaacgtttttatggacgatgagtctcttcgaagaggagatcaactttcaacatcactacttcgagcaattcaagagtctcaaatttctgttattgttttctcaagaaaatacgccgattctcgatggtgtttggatgagttggtggatataatggactgtcacagagtcataggccaaaatgttctgccggtcttctacggagtagatccatctgaagtacgtcatcaaactggcgaattcggaaaagcatttACAAATCTTTTGAATAGAATTTCAGAAgaggaggaggaggaggaggaggaggaagaggaagaagaagaagaagaagatgatgatgaaTCCATGGTTGACTCAACTCGTCAGGAGCTGGAATGGAGGGCGGTTCTTCGTGAGGCGGCTGGCCTTGCTGGGTTCGTAGTCCTAAATTCTAGGAATGAaagtgaggctatcaagggtattgttgagaatgttacacgtttgcttgacaagacagacttgttcattgctaataatccagtgggagttgaatctcgtgttcaagatatgattcaattgctagaccaagatattgaacaattaaatgatgttctactactagggatgtggggtatgggaggagttggaaaaacaaccattgcgaaagctatttataataaaataggccgcaattttgagggcagaagcttccttgctaatattagggaagtttgggaggaaaatgttggacaagtgaatttacaagaacagcttctctttgatatcttcaagcaaatgacaaccaaaatacaaagcattgaatatggaaaagtcatattaaaggacaaactctgccataaaagagtactaattgtacttgatgatgtcaattcattggaccaactaaatgctttgtgtggaagtcgtaaatggtttggttcagggagtagaataatcatcacaactagagatatgcatatacttagagggaatagggttgataaagtatacaaaatgaaaaaaatggatgaaaatgaatcaattgagctttttagttggcatgcattcaagcaatcgattcctcaagaaggttttgctgaaatttctagaaaggtagttgagtattctgggggattaccactcgctatggaagtccttgggtcatatttgtttgatagggaattaacagagtggcaatgtgtattggagaagcttaaaagaattcctaatgatcaagtacaaaagaagctcaaaataagctatgacggcttaaaagatgatactgagaaagaaatattccttgatgtagcttgtttctttattgggatggaccgaaatgatgttacacttatattaaatggatgtggactttttgcaaaaattggaataagtatccttattgagcgaagccttgtaactgttgatgataagaataaacttggaatgcatgatttgttgcgagatatgggaagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtttcatgaggacgtgttccatgtattatcagaacaaactggaacaaaagctattaaggggatggctttgaagttgccaagtgctaatgcaaaatgttatagtactaaatcattcaagaagatgaagagactcagattgcttcaacttgctggagtgaaacttgatggagattttgaatatctttcaagaaatctgagatggctgtcttggcatggattttctttaacacatatacctacaaacttttatagagaaaatttagtttCCCTCGAGTTAGAGAATAGCAATGTCAAACTTCTGTGGAAAGAGGCTCAGaggatggagaagctgaaaattctcaatctcagtcattctcattgtctgacacacactccagacttttcatacttgcctaatcttgaaaaattaatactcacagattgctccaggttatgtgaggtttctcctagcattgaacatctgagcgaaattcttctaatagatttggaggattgtgttagccttcgtagcctcccaagaagcatctataagttgaaatctttgaaaactctcattctttctgggtgttcacagattgacaagttggaagaggacttggagcagatggaatctttaaccactctacttgcaaataacactgcaataacaaaagtgccattttcaatagtaaggtcaaaaaGCATTGGATTTATTTCTCTGTGTGGCTATGAAGGATTTTCACATGATGTGTTTCCATCTATCATTTGGTCTTGGATGTCACCGACAAATAATCTCCCATCCCTGTTTCAAACATCTGTTGCCGCATCAACTCTTGTTTCTTTAGATGTACCATGTAGTAGTTCCAATGAACTATCATCTTTTTCTAACCACCTTCCAACACTTCGAAGTCTTTGGGTGGATTGCGACTCCGAAGATCAACTTTCTCTCGATGCAAAAATAATTTTAGATGCTTTGCATGCCACAGTTTCTAAGGAATTTGAATTAACTGCAAATACATCACAAGTATCAAAACATTCCTTGAAGTCTCTTTTTATTCAAATGGGAATGAATTGTCAAGTCACCAATATTCTGAACGATAAAATTTTACAGAATATGGATGTCAATGAGGATTGCGGTTGTTTGCTCCCTGGAAATAGTTATCCAGATTGGTTAACCTTTAGTTGTGAAGTTAAAAATTACACAAAGGCCACCATTCAACTCTATAAAGGTGAGGCATTGGTCTCTTTTGATGAAGAGGAGGGGCAAAGGGTAATATCAAGTATGGAACCCGGTAACAAAGTGGAGGTTGTTGTTGTTTTTGAGAAATGTTTCATTGTAAAGAAGACAATAATTTATCTTGCATATGATGAACCAAATTGCAAAAGAATGGAGTTATATCATGCACCGGATTTGGATGTCATTTCTCGTAGTGGCGATGAAAGTGAACACTCTGTAAAGAGATTATCTACCGAAGATGAGTCCATTGACGACTTCAATCAAAATAGAAAGAAAAAATATTGA 3177 0.1281 MSSSNNFTKKTRSRAINPRRRYLRSQKSIYEVFLSFRGEDTRASFISHLYASLQNEAINVFMDDESLRRGDQLSTSLLRAIQESQISVIVFSRKYADSRWCLDELVDIMDCHRVIGQNVLPVFYGVDPSEVRHQTGEFGKAFTNLLNRISEEEEEEEEEEEEEEEEEDDDESMVDSTRQELEWRAVLREAAGLAGFVVLNSRNESEAIKGIVENVTRLLDKTDLFIANNPVGVESRVQDMIQLLDQDIEQLNDVLLLGMWGMGGVGKTTIAKAIYNKIGRNFEGRSFLANIREVWEENVGQVNLQEQLLFDIFKQMTTKIQSIEYGKVILKDKLCHKRVLIVLDDVNSLDQLNALCGSRKWFGSGSRIIITTRDMHILRGNRVDKVYKMKKMDENESIELFSWHAFKQSIPQEGFAEISRKVVEYSGGLPLAMEVLGSYLFDRELTEWQCVLEKLKRIPNDQVQKKLKISYDGLKDDTEKEIFLDVACFFIGMDRNDVTLILNGCGLFAKIGISILIERSLVTVDDKNKLGMHDLLRDMGREIIREKSPEELEERCRLWFHEDVFHVLSEQTGTKAIKGMALKLPSANAKCYSTKSFKKMKRLRLLQLAGVKLDGDFEYLSRNLRWLSWHGFSLTHIPTNFYRENLVSLELENSNVKLLWKEAQRMEKLKILNLSHSHCLTHTPDFSYLPNLEKLILTDCSRLCEVSPSIEHLSEILLIDLEDCVSLRSLPRSIYKLKSLKTLILSGCSQIDKLEEDLEQMESLTTLLANNTAITKVPFSIVRSKSIGFISLCGYEGFSHDVFPSIIWSWMSPTNNLPSLFQTSVAASTLVSLDVPCSSSNELSSFSNHLPTLRSLWVDCDSEDQLSLDAKIILDALHATVSKEFELTANTSQVSKHSLKSLFIQMGMNCQVTNILNDKILQNMDVNEDCGCLLPGNSYPDWLTFSCEVKNYTKATIQLYKGEALVSFDEEEGQRVISSMEPGNKVEVVVVFEKCFIVKKTIIYLAYDEPNCKRMELYHAPDLDVISRSGDESEHSVKRLSTEDESIDDFNQNRKKKY 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00263 1058 Gene3D Ribonuclease Inhibitor 576 729 IPR032675 -
Car02g00263 1058 SUPERFAMILY L domain-like 582 872 - -
Car02g00263 1058 SUPERFAMILY "Winged helix" DNA-binding domain 462 568 IPR036390 -
Car02g00263 1058 Gene3D - 217 386 IPR027417 -
Car02g00263 1058 Pfam TIR domain 30 181 IPR000157 GO:0007165
Car02g00263 1058 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 219 485 IPR027417 -
Car02g00263 1058 MobiDBLite consensus disorder prediction 150 175 - -
Car02g00263 1058 ProSiteProfiles TIR domain profile. 28 181 IPR000157 GO:0007165
Car02g00263 1058 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 36 1007 IPR044974 GO:0006952
Car02g00263 1058 Gene3D Ribonuclease Inhibitor 730 873 IPR032675 -
Car02g00263 1058 PRINTS Disease resistance protein signature 256 271 - -
Car02g00263 1058 PRINTS Disease resistance protein signature 735 751 - -
Car02g00263 1058 PRINTS Disease resistance protein signature 333 347 - -
Car02g00263 1058 PRINTS Disease resistance protein signature 426 440 - -
Car02g00263 1058 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 36 1007 - -
Car02g00263 1058 SMART AAA_5 253 393 IPR003593 -
Car02g00263 1058 SMART till_3 29 193 IPR000157 GO:0007165
Car02g00263 1058 Coils Coil 751 771 - -
Car02g00263 1058 Coils Coil 142 173 - -
Car02g00263 1058 SUPERFAMILY Toll/Interleukin receptor TIR domain 25 146 IPR035897 -
Car02g00263 1058 Gene3D - 391 475 IPR042197 -
Car02g00263 1058 MobiDBLite consensus disorder prediction 1029 1058 - -
Car02g00263 1058 Pfam NB-ARC domain 237 471 IPR002182 GO:0043531
Car02g00263 1058 Gene3D - 27 216 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00263 Car-Chr2 2637323 2642576 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00263 17 781 WRKY Transcription Factor Family AT4G12020 30.867 1.11e-85 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00263 - - cam:101494533 1979.91