Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00259 ATGATTAACATTCAAAAAGAAGAAGATTTTCCATTGAAAGCAAAGGCTTCAACTatctcatcatcatcatcatcatcaCAATGGCTACAACTAAAAGATCATCCAAGAATTGTAAGGGTATCAAGAGCCTTTGGGGGAAAAGATAGACATAGCAAAGTTTGCACAATCAAAGGACTAAGAGATAGAAGGGTAAGGCTTTCAATCCAAACAGCAATTCACCTCTATGATCTTCAAGATAGGTTAGGGCTAAATCAACCTAGCAAAGTTGTTGATTGGTTACTAAATGTAGCAAAAGATGAAATTGATGAGCTTCCACCACTTCAAATACCTCAAGAAAACTTCACCCTTGGTTATCCATCTTTTAATGATGATAACACTTCTATTTGGAAGTCAAACCCTAAACAAGTTTTAGGTGAAATGGTTAATCATAAAGAAAATTGGATAAATAAAAGTGAAGAGGATAAAGTGGAGAATAATGATTTTCATGATGCACAACATGTTTTGACCAATCAACCTTCTTTTTTGGGATTGTTGAACAATTCTATGCCACTTGCTTATCATCAATTACAGCCTTCAATTAGAGATATACATTATGGGATAAATGTTGTACCTTTTCCATCATCATTGTCTTTGTCAACACAACAATATTTCCCTTCACATGTTGTTGGAGCAATGGATATGGATCCAAGACAAATCAATTACAACTATGATCAAATGATGAGTTCAAGTTCTCAAAACAAATTCTCTCAATCCAACTCAACAATTCATCATGAGGGTGGATCTTAA 786 0.3308 MINIQKEEDFPLKAKASTISSSSSSSQWLQLKDHPRIVRVSRAFGGKDRHSKVCTIKGLRDRRVRLSIQTAIHLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLQIPQENFTLGYPSFNDDNTSIWKSNPKQVLGEMVNHKENWINKSEEDKVENNDFHDAQHVLTNQPSFLGLLNNSMPLAYHQLQPSIRDIHYGINVVPFPSSLSLSTQQYFPSHVVGAMDMDPRQINYNYDQMMSSSSQNKFSQSNSTIHHEGGS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00259 261 MobiDBLite consensus disorder prediction 240 261 - -
Car02g00259 261 Pfam TCP family transcription factor 46 155 IPR017887 -
Car02g00259 261 ProSiteProfiles TCP domain profile. 46 104 IPR017887 -
Car02g00259 261 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 253 IPR005333 GO:0003700
Car02g00259 261 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 1 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00259 Car-Chr2 2573360 2575102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00259 28 256 TCP Transcription Factor Family AT3G02150 41.634 4.84e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Car02g00259 TCP 3.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00259 - - cam:101511385 514.612