Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00251 ATGTTTTCTTCTACTTTTAATTTCAAATGGATTTCATTCACTCAATTCAActtcttctttttcttctttcttcttttcttttcttctCTAAACGACGCCGTTTCACTCTCTTCCGACAAATCAACTCTTCTCCGTTTCAAATATTCTCTCTCCGACCCCGCCGGTGTACTCTCTTCATGGAACTCCACCGCCGGTGACGGTGACTCCGGTTACTGTTCCTGGTTTGGCGTTCTCTGTGATTCAAGATCGCGTGTAGTTGCTCTCAACATCACCGGAAACGGTGGTGGCGTTGATTCCGGTGGTGGTGACCGGAGTTCTCACCCGTGCTCCGGTTTTAGTAAGTTTCCGCTTTATGGATTTGGAATTAGGAGAAGCTGTGTGGGTTTTAAGGGTTCTTTATTTGGAAAGTTTCCATCTTTGATCAGTGAGTTAACTGAGCTTAGGGTTTTGTCTTTACCCTTTAATGGGTTGGATGGTTCAATTCCTGAAGAGATTTGGAGTATGGAGAAACTTGAGGTTCTTGATTTAGAAGGTAATTTGATTAGTGGTTATCTTCCTTTTCGTGTTCGAGGATTGAAAAAATTGAGGATTTTGAATTTGGGGTTTAATAAGATTGTTGGAGTTGTACCTAGTGTTTTATCTTCTCTTGATAGTTTAGAGGTTTTGAATTTAGCTTCAAATGGTTTGAATGGTTCTGTTCCTGGTTTTGTTGGGAAACTTAGAGGGGTGTATTTGTCTTTTAATCAATTCAGTGGTGTTATTCCTAAGGAGATTGGTGAAAATTGTGGGAAGCTTGAGCATTTGGATTTGTCTGGTAACTCTTTAGTTCAAGCAATTCCGAAAAGTTTGGGGAGTTGTGGTGTTTTGAGGACACTTTTGTTGTATTCAAATTTGTTGGAAGAGGATATTCCTACTGAATTTGGGAACCTTAAGAGCCTTGAGGTGCTGGATGTTTCGAGGAATACGCTTAGCGGTTCTATTCCTCACGAGCTTGGAAATTGTAAGGAGCTTTCTGTTGTTGTGCTGTCCAACCTTTTCGATCCAGTTGAGGATGTTGGATTTGTTTCTTTGAGTGATGAGTTTAATTATTTTGAAGGTGCAATGCCTGAGGAAATTGTGTCGCTTCCCAAGCTTAGGATTTTGTGGGCTCCCATGGTGAATTTGGAGGGAAGTTTTCCTAATAGTTGGGGTGCTTGTGGGGAGTTGGAGATGGTTAATTTGGCTCAGAATTTCTTCACCGGAGAGTTCCCAAACCGGCTTGTTTTCTGTAAGAAGCTGCATTTTCTTGATCTGAGCTCTAACAATCTTACTGGGGAGCTTTCTGAGGAACTTCATGTTCCATGTATGACTGTGTTTGATGTTAGTGGAAACATGTTGTCTGGTTCAGTTCCTGATTTCTCCAACAATGTTTGTTCTCCCTTTCCTTCCTGGAGTAGGTATCCATTTGAATCTAATGATGTTACGTCTCCTTATGCATCATTTTTTTCGACAAAGGTTCATGAGAGAACCCTTTTCGCATCATTAGGTCAAGTTGGTCTTTCAGTTTTGCACAACTTCGGACAAAACAACTTTACCGGAATTCAGTCATTGCCAATAGCAAGTGGCAGGATGGAGGAAAAGAGTGGTTACACACTTCTTGTTGGAGAGAACAAGCTCACGGGACCATTTCCCACATATTTGTTGAAGAAATGTGATGGATTAGATGCATTGCTTTTGAATGTCAGTTATAATATTCTTACTGGTGAGATTCCTTCTAATGTTAGTAGAGCGTGCAGATCACTGAAGTTTTTGGATGCATCTGGAAATCAGATTTCAGGACCAATCCCCTTTACTATAGGGGATTCGGTCTCTCTTGTTTCCTTGAACCTCAGTAGAAACCGGTTACAGGGTCAGATTCCCACCAGCCTCTGCCAGATGAAAGATCTGAAGTTTCTCTCTTTAGCTGGTAATAACTTGAGTGGCTCAATTCCTGCTAGTCTGGGGAAGTTGTACTCTTTACAAGTCTTGGACCTTTCGACAAACACTCTTACCGGGGAGATTCCTAAGTTTATTGAGAACATGGGAAATCTGACTGATGTTTTGCTCAATAATAACAATCTTTCTGGACATATTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTTTGGCAAATGTCACTACACTCTCTGCATTCAATGTGTCTTTCAATAATTTATCTGGATCCTTACCATCAAATAGTAGCTCGATCAAATGTAGCAGTGCTGTCGGAAATCCATTTCTGAGTTCCTGCCGCGGAATTTCTCTTACTGTGCCATCAGCAAATCAACAAGGGCAGATTGATGACAATTCTTCTATTACTGCACAAGACACTGGAAAAAATAGTAATAATGGTTTCAGCGCTATTGAAATAGCATCTATAACTTCTGCCTCAGCCATTGTTTCTGTTCTTATAGCTCTTATTGTTCTGTTTTTCTTCACACGAAAGTGGAAGCCGAATTCCAGGGTTGGTGGTTCTGCAAAAAGAGAAGTTACAGTGTTTACTGATATCGGTGTCCCATTGACATTTGAGAATGTTGTACAAGCAACAGGAAACTTCAATGCAAGCAACTGTATTGGGAGTGGAGGATTTGGGGCAACTTATAAGGCAGAGATATCGCCGAGAATCTTGGTGGCAGTGAAACGTCTATCAGTTGGACGTTTCCAAGGTGTTCAACAATTTCATGCCGAGATTAAGACCCTTGGAAGGCTTCATCATCCAAACCTTGTCACTCTGATCGGTTACCATGCTTGTGAGATAGAGATGTTTCTCATATACAATTATCTTCCGGGCGGTAATCTTGAAAAGTTCATCCAGGAGAGATCCACAAGGGCCGTGGATTGGAAAATTCTTCACAAGATTGCATTGGACATAGCGCGTGCACTTTCCTATTTGCACGATCAATGTGTACCCCGTGTTCTTCATCGCGATGTCAAGCCTAGCAATATCTTGTTGGACGACGATTTCAATGCTTATTTATCTGACTTTGGACTGGCCAGACTTCTCGGAACCTCAGAAACACACGCTACAACCGGTGTGGCAGGAACATTTGGGTATGTTGCTCCGGAATACGCCATGACATGTCGTGTTTCTGACAAGGCTGACGTGTATAGCTACGGTGTTGTGCTTCTTGAGTTGCTTTCTGATAAGAAAGCGTTGGACCCTTCATTTTCTTTATATGGAAATGGTTTCAATATAGTAGCATGGGCATGCATGCTACTTAGGGAAGGAAGAGCAAAAGAGTTTTTCACTGCAGGGTTATGGGATGCAGGACCAGAAAATGATTTGGTTGAGGTTCTTCACTTAGCAGTTGTTTGTACAGTTGATTCACTATCAACTAGACCTACAATGAAACAAGTTGTGAAAAGGCTTAAACAACTTCAACCACCATCATGCTAG 3447 0.405 MFSSTFNFKWISFTQFNFFFFFFLLFFSSLNDAVSLSSDKSTLLRFKYSLSDPAGVLSSWNSTAGDGDSGYCSWFGVLCDSRSRVVALNITGNGGGVDSGGGDRSSHPCSGFSKFPLYGFGIRRSCVGFKGSLFGKFPSLISELTELRVLSLPFNGLDGSIPEEIWSMEKLEVLDLEGNLISGYLPFRVRGLKKLRILNLGFNKIVGVVPSVLSSLDSLEVLNLASNGLNGSVPGFVGKLRGVYLSFNQFSGVIPKEIGENCGKLEHLDLSGNSLVQAIPKSLGSCGVLRTLLLYSNLLEEDIPTEFGNLKSLEVLDVSRNTLSGSIPHELGNCKELSVVVLSNLFDPVEDVGFVSLSDEFNYFEGAMPEEIVSLPKLRILWAPMVNLEGSFPNSWGACGELEMVNLAQNFFTGEFPNRLVFCKKLHFLDLSSNNLTGELSEELHVPCMTVFDVSGNMLSGSVPDFSNNVCSPFPSWSRYPFESNDVTSPYASFFSTKVHERTLFASLGQVGLSVLHNFGQNNFTGIQSLPIASGRMEEKSGYTLLVGENKLTGPFPTYLLKKCDGLDALLLNVSYNILTGEIPSNVSRACRSLKFLDASGNQISGPIPFTIGDSVSLVSLNLSRNRLQGQIPTSLCQMKDLKFLSLAGNNLSGSIPASLGKLYSLQVLDLSTNTLTGEIPKFIENMGNLTDVLLNNNNLSGHIXXXXXXXXXXXXXXXXXXXXGLANVTTLSAFNVSFNNLSGSLPSNSSSIKCSSAVGNPFLSSCRGISLTVPSANQQGQIDDNSSITAQDTGKNSNNGFSAIEIASITSASAIVSVLIALIVLFFFTRKWKPNSRVGGSAKREVTVFTDIGVPLTFENVVQATGNFNASNCIGSGGFGATYKAEISPRILVAVKRLSVGRFQGVQQFHAEIKTLGRLHHPNLVTLIGYHACEIEMFLIYNYLPGGNLEKFIQERSTRAVDWKILHKIALDIARALSYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSLYGNGFNIVAWACMLLREGRAKEFFTAGLWDAGPENDLVEVLHLAVVCTVDSLSTRPTMKQVVKRLKQLQPPSC 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00251 1148 Pfam Leucine rich repeat N-terminal domain 37 80 IPR013210 -
Car02g00251 1148 CDD STKc_IRAK 875 1143 - -
Car02g00251 1148 Coils Coil 704 704 - -
Car02g00251 1148 ProSiteProfiles Protein kinase domain profile. 869 1143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00251 1148 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 17 1147 - -
Car02g00251 1148 SMART LRR_typ_2 192 215 IPR003591 -
Car02g00251 1148 SMART LRR_typ_2 663 687 IPR003591 -
Car02g00251 1148 SMART LRR_typ_2 310 334 IPR003591 -
Car02g00251 1148 SMART LRR_typ_2 144 168 IPR003591 -
Car02g00251 1148 SMART LRR_typ_2 216 238 IPR003591 -
Car02g00251 1148 SMART LRR_typ_2 262 286 IPR003591 -
Car02g00251 1148 SMART LRR_typ_2 616 639 IPR003591 -
Car02g00251 1148 SMART serkin_6 869 1147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00251 1148 Gene3D Ribonuclease Inhibitor 352 478 IPR032675 -
Car02g00251 1148 Gene3D Transferase(Phosphotransferase) domain 1 945 1146 - -
Car02g00251 1148 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 17 1147 - -
Car02g00251 1148 SUPERFAMILY L domain-like 571 768 - -
Car02g00251 1148 SUPERFAMILY RNI-like 135 473 - -
Car02g00251 1148 SUPERFAMILY Protein kinase-like (PK-like) 850 1140 IPR011009 -
Car02g00251 1148 Gene3D Phosphorylase Kinase; domain 1 833 944 - -
Car02g00251 1148 Pfam Leucine Rich Repeat 264 286 IPR001611 GO:0005515
Car02g00251 1148 Gene3D Ribonuclease Inhibitor 495 712 IPR032675 -
Car02g00251 1148 ProSitePatterns Serine/Threonine protein kinases active-site signature. 989 1001 IPR008271 GO:0004672|GO:0006468
Car02g00251 1148 Pfam Protein kinase domain 872 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00251 1148 Gene3D Ribonuclease Inhibitor 36 236 IPR032675 -
Car02g00251 1148 Gene3D Ribonuclease Inhibitor 237 351 IPR032675 -
Car02g00251 1148 ProSitePatterns Protein kinases ATP-binding region signature. 875 897 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00251 Car-Chr2 2507706 2511152 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00251 19 1148 Receptor kinase-like Gene Family AT3G02130 61.864 0.0 1322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Car02g00251 Pkinase 9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00251 - - gmx:100819882 1660.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00251 02 2507706 2511152 Car02g00251 02 2507706 2511152 ECH