Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car02g00247 | ATGTGGTACTGCAGTTTCTCAGGTCCTGTCCAGGAGAAGATCTCCAGTAGTGCATTACCTGAAAAGAAGCTTTCTGAATCAAGTTTTTCTATCCCAAGCCAGACTAAAAAAGACTATCACGCAACCCATAGCCGTCAGCTTGATGATTTTTCTTCAAATGACATTTCTATATTGTCTTCTAAGAAATCAAAAGTAAAGAAGAAAGGTGGTGATGTAATATCTATTGCACCTGACCCTGCTGAGCTTCAAGATGCCATCATTGGAAAGTTTCTTGAGTTTTTGGAGGACTTATGTAGCAAGGCTGAATGGAATGGTGACGATAGAGATGAAGCAGAATGGTTGCCACTGCCCCTTTCAGATCTTAGATTGCTTGTTAATGAAATAATGACTATACGTGAGAAGAAACTTCTGCATTTGGTTCCTGTAGAATTTCTTGTTAGACTGCTAAAGGTTTTAGATCATCAGATACATAGAGCAGAAGGCCTGTCGATTGAGGATTGCGATAATTCCAATTCAGAACTAGTTTCGGCTCTTTTAGTTGCGTTGGAGTCCATTCATGCTGCTCTGGCGGTGATGACTCATACTGACATGCCAAAGCAACTTTATAAAGAAGAGGTCATTGAGAGAATTCTGGAGTTTTCCAGGCATCAGATAATGGATGTGATGTGTGCATGTGATCCATCATATCGTGCATTATACAGACCTAGTGAAAACACTACACTTGAAGTCGATGAAGAAGAAAGTGATGCTGAGTTTGGTTCAGCAAGTAAAAAACGGCGTACCAGCAGCAAGACAGTAAAGTTGAAGAAATCAGCATCAAACAGGTTCTCCAGTGCTGTGAATGTTATTCTTCAGAAGTTGTGTACTGTTGTTGGTCTACTCAAGGATTTGTTGTTAATAGAGAGGTTGTCAGATAGTTGCATTTTACAACTTATAAAAACAAGCATTACAACATTCTTGGTTGATAACATCCAGCTCTTGCAATTGAAGGCAATTGGTTTAGTTAGTGCGATATTCTATTTATACACACAACATCGCACTTATGTGATAGATGAAATGCTTCAACTTCTTTGGAAATTACCTCATTCAAAGCGAGCTTTAAGGAGTTATCACATACGCGAGGAAGAGCAAAGACAGATCCAGATGATTACTGCTTTGCTGATTCAGTTAATTCACTGTAGTGCTAACCTTCCTGATACTTTAAGAGAAGCATCAAGTGGTAACTCTGTATTGGAAGTCTTGGTTGATGCTAGTTATCCTACTAAATGCCGTGAGGCAGTAACAGAAGCCTGCTGTCTATTCTGGGGCCGTGTACTTCAGCGGCTTACAAGTGCAAAGACTCAGGATACTTCTGAATTGAAATCCATAATGGAGAATCTTGTTACTGATTTACTGACGACTCTAAATTTACCTGAATATCCTGCTTCAGCTTCTATTTTAGAGGTTCTATGTGTCCTACTAATTCAGAATGCTGGAACAAACTCCAAGGATATCACTGCACGCTCCATGGCTATTGATATTCTTGGCACTATTGCTGCAAGGTTGAAGCGTGATGCTATGATTTGTAGCCGGGAGAAGTTCTGGATACTTCGGGATCTACTTAGTCAGGACGCTGCTACTCGGCATTATCCAAAAGATACATGTTGTGTCTGTTCGGGTGGAAGGGTAGAAAATTTGGTCATATGTCCAGGCTGCAATAGGCCTTTTCATGCTGATTGTCTGGACATCAAAGAAGATGAAGTTCCTAACCGGAACTGGTACTGTCATATGTGCATCTGCTCAAAGCAACTGCTTGTATTACAGTCATATTGCAATTCCCAGCGCAAGGGTAATGTAAAAAAGAACCATGAAGTTTCAAAGGATGATTCTGCAGTTTCTGACCATGAAATTGTTCAACAATTGCTTTTGAATTACCTTCAAGATGTCACCTCTGCTGATGACCTGCATCTTTTCATTTGCTGGTTTTATCTCTGCTCGTGGTATAAAAATGATCCAAATTGCCAGCAGAAGCTCATTTACTACATTGCTAGGATGAAATCAAGAATCATAATACGGGATTCTGGTACTGTTTCATCCATGCTGACGAGAGATTCAATCAAGAAGATTACTCTAGCTTTAGGCCAAAAAAGTTCATTTTGTCGAGGGTTTGATAAGATTTTTCACACGCTTTTGGGAAGCTTGAGGGAGAACTCTCCAGTTATTAGGGCTAAAGCTTTACGAGCAGTTAGTATCATTGTAGAGGCCGACCCAGAGGTATTGGGTTATAAACAAGTACAATCAGCTGTTGAAGGTAGGTTCTGTGACTCGGCGATATCTGTCAGAGAAGCCGCATTGGAACTTGTTGGTAGGCATATTGCTTCACATCCCGATGTGGGTTTTAAGTATTTTGAGAAGATTACAGAGAGAATTAAAGACACTGGAGTAAGTGTTCGGAAACGAGCTATAAAAATTATTCGAGATATGTGCAGTTCAAATGCCAACTTCTCGGGATTTACAAGAGCCTGCACAGAGATAATTTCACGTGTTACTGATGATGAATCGAGTATACAGGATCTTGTTTGCAAAACATTTTATGAGTTCTGGTTTGAGGAGCCTTCTGCTTCCCAAACTCAGGTTTTTGGAGATGGTAGTACAGTTCCACTTGAGGTAGCTAAGAAAACAGAACAAATTGTTGAAATGTTGAAGAGAATGCCCAATAATCAACTTCTTGTAACCGTAATAAAGCGCAACTTGACACTTGATTTTTTACCGCAATCAACAAAAGCAATCGGGGTCAACCCAGTGTCCCTTGTAACAGTGCGTAAACGTTGTGAATTGATGTGCAAATGCTTGCTGGAGAAGATATTGCTGGTTGACGAAATGAACAGTGATGAAGTGGAAAAGCATGCACTTCCATATGTGCAAGTCTTGCATGCATTTTGTCTTGTGGACCCGACTCTCTGTGCACCAGCTTCTAACCCTTCCCAGTTTGTTGTTACGTTGCAGTCATATCTGAAGACTCAGGTTGACAATAGCATGGTTGCACAGCTACTTGAGAGTATAATATTTATAATTGATGCTGTGTTGCCATTGCTGCGGAAGTTACCTCTGAGTATTGTGGATGAACTTGAGCAAGATTTGAAGCAGTTGATTGTCCGGCATTCTTTCTTGACAGTTGTCCATGCTTGTATCAAATGTCTCTGCTGTATGAGTAAGATGGCAGGAAAGGGGGATGCTGTAGTTGAGCAACTTATTCAGGTCTTCTTGAAATGTTTGGATACCCAGGCAGTTGTAAACAAGCAGCAAGTGGGGCGATCTCTCTTCTGTCTCGGTTTGCTTATTCGTTATGGCAACATATTGTTAGCAAGCTCTGGTAATAAACTTGTTGATGTTAGGAGGAGTCTCAGCTTGTTTATGAAGTATCTTGACGTGGATGATTATTCTCTTAAGGTTAGATCATTGCAGGCATTAGGATATGTTCTAATTGCAAGGCCTGAATATATGTTAGAAAATAACATTGGAAAGATACTGGAGGGTACACTGTCGAATACTGCTGATGTTCGAATTAAGATTCAAGCATTGCAAAACATGTTTGAGTATCTTCTTGATGCTGAAAGCCAAATGGAAACAGACAAAGTTGAAGATAACGCATCTGGTCACTCGGTCAGAGCTGGGCATAGTGTACCTGTTGCGGCTGGTGCTGGTGATACAAACATATGCGGTGGTATTATTCAGTTATACTGGGATAATATTTTGGGCAGATGTTTAGATTCCAGTGAACAAGTTCGCCAAACAGCCTTGAAGATTGTTGAAGTTGTGCTGCGCCAAGGTCTTGTTCATCCCATCACCTGTGTTCCATATCTTATAGCACTTGAAACGGATCCTTTGGAGTCAAATGCAAAGTTGGCTCATCATCTCCTAATGAATATGAATGAGAAGTATCCTGCATTTTTTGAAAGCCGCTTGGGCGATGGACTTCAAATGTCATTTATGTTCATGCAATCTGTTTGTGGTAGTCCTGAAAATGTTAATCATAAGACACCATCCAAGATCCCTGTTTCTGGAAAAGGGAAACCTGAGTCTGACTCGCTCACTCAAGCACGACTTGGTGTTTCTCGAATATACAAGCTCATTAGAGGGAACCGGATATCAAGGAACAAATTTATGTCCTCAATTGTGCGGAAGTTTGATAATCCAAGATGGAACAAATTAGTAATACCTTTCTTAATGTACTGCACAGAGGTCCTTGCCTTGCTTCCATTCACTGCACCTGATGAGCCGCTTTATTTAATTTATGCCATCAATCGAGTAGTTCAGTTGAGGGCTGGTCCACTGGAGGCAAATTTCAAAGCCTGGAGTTCAAGCTTGTTACAAAGAGAGGGCGACGGTACACCTCATGGGAATGGAATGTATCAACGGGTGCCACATGAACCTATTCTTACAACCCAAGTTCAGTCAATGGACTTGAATGGCACATTTCAGCAAAATCTAGATGTTCAGCCTTACTTAGTTGATATGACATCAGTGGATTTAAACGGAACAAATCACCAACTGCCAGATTATCCTTTATCACATAATGGTGGGTCAAAAGTAAAGCCACACACTGCTGGTTTTGCAGATTCCCTTACCTTCTCAGAAGATGATACAGAGAAATTTCAGGCTGACTGTTTATCTGCGATTGCATTGCAACTTCTTTTAAAGCTAAAGAGACACCTAAAAATCACGTATAGTCTCGATGATGCCAAATGTCAGGCTTATTCTCCAAGTGAACCGCCAAAACCTGGAGATGTAATCTCAAAACAGAGTATTCCATTTAATATTGGTGAATCTCAGTTCAGTTTGCCTACAAGTCCGCAAGAATTAATACAAAGATATCAGGAGTTTAAAAACGCATTGAAGGAAGATACAGTGGATTATTCACTCTACACTGCAAATATAAAACGGAAGCGACCAACACCCAGAAAAGGTCGAAAAACTGGACCTATACCGATGGTAGGTGGGGATTTTGGGGATGATGATGATGAAGATTGGGCTGGTGGAGCGCGCAACATAAATTTTAGTGGTGGACGCAGGGCTAACCTTAGAAGCTCCAGACAATACTGA | 5082 | 0.4073 | MWYCSFSGPVQEKISSSALPEKKLSESSFSIPSQTKKDYHATHSRQLDDFSSNDISILSSKKSKVKKKGGDVISIAPDPAELQDAIIGKFLEFLEDLCSKAEWNGDDRDEAEWLPLPLSDLRLLVNEIMTIREKKLLHLVPVEFLVRLLKVLDHQIHRAEGLSIEDCDNSNSELVSALLVALESIHAALAVMTHTDMPKQLYKEEVIERILEFSRHQIMDVMCACDPSYRALYRPSENTTLEVDEEESDAEFGSASKKRRTSSKTVKLKKSASNRFSSAVNVILQKLCTVVGLLKDLLLIERLSDSCILQLIKTSITTFLVDNIQLLQLKAIGLVSAIFYLYTQHRTYVIDEMLQLLWKLPHSKRALRSYHIREEEQRQIQMITALLIQLIHCSANLPDTLREASSGNSVLEVLVDASYPTKCREAVTEACCLFWGRVLQRLTSAKTQDTSELKSIMENLVTDLLTTLNLPEYPASASILEVLCVLLIQNAGTNSKDITARSMAIDILGTIAARLKRDAMICSREKFWILRDLLSQDAATRHYPKDTCCVCSGGRVENLVICPGCNRPFHADCLDIKEDEVPNRNWYCHMCICSKQLLVLQSYCNSQRKGNVKKNHEVSKDDSAVSDHEIVQQLLLNYLQDVTSADDLHLFICWFYLCSWYKNDPNCQQKLIYYIARMKSRIIIRDSGTVSSMLTRDSIKKITLALGQKSSFCRGFDKIFHTLLGSLRENSPVIRAKALRAVSIIVEADPEVLGYKQVQSAVEGRFCDSAISVREAALELVGRHIASHPDVGFKYFEKITERIKDTGVSVRKRAIKIIRDMCSSNANFSGFTRACTEIISRVTDDESSIQDLVCKTFYEFWFEEPSASQTQVFGDGSTVPLEVAKKTEQIVEMLKRMPNNQLLVTVIKRNLTLDFLPQSTKAIGVNPVSLVTVRKRCELMCKCLLEKILLVDEMNSDEVEKHALPYVQVLHAFCLVDPTLCAPASNPSQFVVTLQSYLKTQVDNSMVAQLLESIIFIIDAVLPLLRKLPLSIVDELEQDLKQLIVRHSFLTVVHACIKCLCCMSKMAGKGDAVVEQLIQVFLKCLDTQAVVNKQQVGRSLFCLGLLIRYGNILLASSGNKLVDVRRSLSLFMKYLDVDDYSLKVRSLQALGYVLIARPEYMLENNIGKILEGTLSNTADVRIKIQALQNMFEYLLDAESQMETDKVEDNASGHSVRAGHSVPVAAGAGDTNICGGIIQLYWDNILGRCLDSSEQVRQTALKIVEVVLRQGLVHPITCVPYLIALETDPLESNAKLAHHLLMNMNEKYPAFFESRLGDGLQMSFMFMQSVCGSPENVNHKTPSKIPVSGKGKPESDSLTQARLGVSRIYKLIRGNRISRNKFMSSIVRKFDNPRWNKLVIPFLMYCTEVLALLPFTAPDEPLYLIYAINRVVQLRAGPLEANFKAWSSSLLQREGDGTPHGNGMYQRVPHEPILTTQVQSMDLNGTFQQNLDVQPYLVDMTSVDLNGTNHQLPDYPLSHNGGSKVKPHTAGFADSLTFSEDDTEKFQADCLSAIALQLLLKLKRHLKITYSLDDAKCQAYSPSEPPKPGDVISKQSIPFNIGESQFSLPTSPQELIQRYQEFKNALKEDTVDYSLYTANIKRKRPTPRKGRKTGPIPMVGGDFGDDDDEDWAGGARNINFSGGRRANLRSSRQY | 1693 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car02g00247 | 1693 | PANTHER | EXPRESSED PROTEIN-RELATED | 13 | 1684 | - | - | |
| Car02g00247 | 1693 | Pfam | HEAT repeat associated with sister chromatid cohesion | 740 | 781 | IPR026003 | - | |
| Car02g00247 | 1693 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 532 | 602 | IPR013083 | - | |
| Car02g00247 | 1693 | MobiDBLite | consensus disorder prediction | 16 | 37 | - | - | |
| Car02g00247 | 1693 | PANTHER | NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED | 13 | 1684 | IPR033031 | GO:0003682|GO:0010468|GO:0061780 | |
| Car02g00247 | 1693 | ProSitePatterns | Zinc finger PHD-type signature. | 548 | 591 | IPR019786 | - | |
| Car02g00247 | 1693 | Pfam | PHD-finger | 548 | 593 | IPR019787 | - | |
| Car02g00247 | 1693 | Pfam | Sister chromatid cohesion C-terminus | 1233 | 1430 | IPR024986 | - | |
| Car02g00247 | 1693 | Gene3D | - | 719 | 1192 | IPR011989 | - | |
| Car02g00247 | 1693 | MobiDBLite | consensus disorder prediction | 16 | 43 | - | - |
Showing 1 to 10 of 15 entries
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car02g00247 | K06672 | - | gmx:100792021 | 2627.82 |
Showing 1 to 1 of 1 entries