Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00222 ATGGGTTGTATTAGCTCCAAACATGCGGTTGCCGGAGATTCTTCTCCGTCACCGATCGTCCGAGACATTGGTGAGGTTGTTCCTTCTTCAAAGGGTCATTCTGGTTTGTTGGTTTTGGATTCTAAATCATCATTAGATGAAaataataataataaaaatagtaaatttactaaaaataatTCCAAAAAAAGTAGTGGCTCTTTTAGCTTCAGAATTGGATTTACACAAAGGCatgttgaagctgaacaaattgctgctggttggcctccgtggcttacagcttctgcagctgaagctgttCAAGGTTGGATTCCTCTCAAAGCTGATGCTTTTCAAAAGTTAGAGAAGATTGGACAAGGAACATATAGCAGTGTGTTCCGAGCCCGTGAAGTCGAAACTGGGAGGATGTTTGCTTTGAAAAAGGTGCGCTTTGACAATTTCCAAGCTGAGAGCATTAGATTCATGGCAAGAGAAATAACAATTCTCAGAAGGCTTGACCACCCAAACATCATGAAATTGGAAGGAATAATCACTTCTCGACTATCTAGTAGCATATACCTTGTGTTTGAATACATGGAGCATGATCTTGCTGGCCTAGTATCTCGTCCCGATATCGTGTTCACCGATGCACAGATAAAATGCTACATGAGGCAACTATTAAGTGGACTTGAGCATTGTCATGTTCGCGGTATCATGCATCGAGATATCAAAGTATCGAATATCTTGTTGAACAATGAAGGTGTTCTCAAGATTGGAGATTTTGGATTGGCAAACACAATTAGTACTAACAATAAACATCATTTAACAAGTCGTGTAGTGACTCTATGGTATCGTCCGCCTGAGCTCTTGATGGGAGCAACCAATTATGGAGTATCGGTCGATTTGTGGAGTGTTGGATGTGTATTTGCAGAACTTTTTCTTGGGAAGCCTGTTCTTAAGGGGAGAACTGAGGTTGAACAATTACACAAAATTTTTAAACTGTGTGGTTCTCCACCTGATGAGTTTTGGAAAAAGAACAAGCTTCCTCATGCAACAATGTTTAAACCTCAAACTAATTACGAAAGCTCTCTTAGAGAAAGGTGTGTAGATTTTCCTGAATCAGCTGTAAATCTACTCGAGACTTTACTGTCTATTGATCCAACCAAGCGTGGCACTGCCTCTTCTGCTCTATTATCTGAGTATTTCACTACCAAGCCATATGCTTGTAATCCATCAAGCCTGCCAAAGTATACACCTAGCAAAGAAATGGATGCTAAAGGTCATGAAGATACATCCAGTAAAAAGACCGGAGATAAAACGCGAGATGCTGCAACATCAAGAAGACAACAAAGACGAGTCTATAAAGGTTTCGAACAGAACAATCTCGGTAAAACAACTGCAAAAGAGAATACTAGAAAAGATGATGGTAAAACACATGTTACAAAGGGAAAAGGAGGAGGAGCTATGCACAAAGATCATACAAAGCCTTCAATGGATACAATGTCAGAGACTTCTCAAATGGTGAATGTTGCTGATAGTAATGGATACAGTGTACCGGTACAAGTTCAAGGATCTAATGATTATTCATGGACAAAAAGAAGAAAACAAGATGCATCATCCACACTATCAGATGGATCAAGAAGTAAAATTAGTGCATTGGATCCTCACTTTGCAAAAGGCACATATGATTTAACCAAACAAAGGATTTCCATGGATTTTGATCCCAAGGAACTGATGAATCAGGGTCAAAAAGAAGAACAGGGTGCATATTGGAATGATAGTGTGCGGCGCGCAGCTCGTAAATCAAGATTTGGAAGAGATAAATGA 1806 0.3754 MGCISSKHAVAGDSSPSPIVRDIGEVVPSSKGHSGLLVLDSKSSLDENNNNKNSKFTKNNSKKSSGSFSFRIGFTQRHVEAEQIAAGWPPWLTASAAEAVQGWIPLKADAFQKLEKIGQGTYSSVFRAREVETGRMFALKKVRFDNFQAESIRFMAREITILRRLDHPNIMKLEGIITSRLSSSIYLVFEYMEHDLAGLVSRPDIVFTDAQIKCYMRQLLSGLEHCHVRGIMHRDIKVSNILLNNEGVLKIGDFGLANTISTNNKHHLTSRVVTLWYRPPELLMGATNYGVSVDLWSVGCVFAELFLGKPVLKGRTEVEQLHKIFKLCGSPPDEFWKKNKLPHATMFKPQTNYESSLRERCVDFPESAVNLLETLLSIDPTKRGTASSALLSEYFTTKPYACNPSSLPKYTPSKEMDAKGHEDTSSKKTGDKTRDAATSRRQQRRVYKGFEQNNLGKTTAKENTRKDDGKTHVTKGKGGGAMHKDHTKPSMDTMSETSQMVNVADSNGYSVPVQVQGSNDYSWTKRRKQDASSTLSDGSRSKISALDPHFAKGTYDLTKQRISMDFDPKELMNQGQKEEQGAYWNDSVRRAARKSRFGRDK 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00222 601 PANTHER CELL DIVISION PROTEIN KINASE 1 595 - -
Car02g00222 601 MobiDBLite consensus disorder prediction 566 601 - -
Car02g00222 601 MobiDBLite consensus disorder prediction 492 522 - -
Car02g00222 601 Pfam Protein kinase domain 111 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00222 601 Gene3D Transferase(Phosphotransferase) domain 1 194 435 - -
Car02g00222 601 MobiDBLite consensus disorder prediction 405 554 - -
Car02g00222 601 CDD STKc_CDK9_like 111 395 - -
Car02g00222 601 SUPERFAMILY Protein kinase-like (PK-like) 106 400 IPR011009 -
Car02g00222 601 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Car02g00222 601 Gene3D Phosphorylase Kinase; domain 1 98 193 - -
Car02g00222 601 PANTHER CYCLIN-DEPENDENT KINASE 1 595 - -
Car02g00222 601 MobiDBLite consensus disorder prediction 460 491 - -
Car02g00222 601 SMART serkin_6 111 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00222 601 ProSitePatterns Protein kinases ATP-binding region signature. 117 140 IPR017441 GO:0005524
Car02g00222 601 MobiDBLite consensus disorder prediction 1 21 - -
Car02g00222 601 MobiDBLite consensus disorder prediction 41 65 - -
Car02g00222 601 MobiDBLite consensus disorder prediction 414 447 - -
Car02g00222 601 ProSiteProfiles Protein kinase domain profile. 111 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00222 601 MobiDBLite consensus disorder prediction 40 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00222 Car-Chr2 2243962 2248331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00222 103 443 Core Cell Cycle Gene Families AT5G10270 47.339 3.29e-111 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Car02g00222 Pkinase 1.7e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00222 - - gmx:100790917 893.649