Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00221 ATGGGTTTCTACACTCTCTCTATTTCTTTCTCATACTTCAACTTGCGTTTTCTCGATTACTCGCTGATTTCAAAAATGGACGGAACAGCTGGCCCTGGTGGAAGTGCGAATGGGTTTCTTCGAAATTATAAAATGGGAAAAACACTTGGCATTGGGTCCTTTGGCAAGGTGAAAATTGCAGAGCATGTATTGACTCGTCATAAAGTTGCCATAAAGATTCTTAACCGCCGCAAGATAAAGAACATGGAAATGGAAGAAAAAGTGAGAAGGGAAATCAAAATTTTAAGATTGTTCATGCATCATCACATTATACGTCTTTATGAGGTTGTAGAAACCCCTACGGACATATATGTGGTGATGGAATATGTGAAATCTGGAGAGCTCTTTGATTACATAGTGGAAAAGGGTAGGTTGCAAGAAGATGAAGCCCGGAGTTTCTTCCAGCAGCAGATAATCTCTGGTGTGGAGTACTGTCACAGGAATATGGTAGTTCATAGAGACCTGAAACCTGAGAATTTACTTTTGGACTCAAAATGCAATGTCAAGATTGCTGATTTTGGCTTGAGCAACATCATGCGTGATGGTCACTTTCTTAAGACAAGTTGTGGAAGTCCTAACTATGCAGCTCCAGAGGTTATTTCTGGGAAATTATATGCTGGACCTGAAGTAGATGTTTGGAGCTGTGGTGTGATTTTATATGCTCTTCTCTGTGGCACTCTTCCTTTTGATGATGAAAATATTCCCAACCTCTTTAAAAAAATAAAGGGTGGGATATATACACTTCCTAGTCATCTATCTCCTGGTGCCAGAGATTTGATACCAAGGCTTCTTGTTGTGGATCCCATGAAGAGGATGACCATACCTGAGATACGACAACACCCATGGTTCCAAGTTCGTCTGCCGCGTTATTTAGCGGTGCCACCACCAGATACACTTCAACAAGCCAAAAAGATTGATGAGGAGATTCTTCAGGAGGTGGTAAATAAGGGATTTGACAGGAATCAATTGGTTGAGTCCCTTAGCAACAGGATACAAAATGAGGGTACTGTAACTTACTATTTGTTATTGGACAACCGTTTTCGTGTTTCCACTGGCTATCTCGGAGCTGAGTTTCAAGAGACAATGGATTCTGGTTTGAACCATGTCCACTCCAGTGAAGTTGCTTCTCCAGTTGTTGGACACCGCTTTTCAGGGTATATGGATTATCAAGGAGTAGGAACGAGGCAACAGTTCCCTGTTGAGAGAAAATGGGCCCTTGGGCTTCAGTCTCGAGCCCAACCTCGTGAAATAATGGCCGAGGTCCTTAAAGCTCTGCAAGAATTGAATGTCTGTTGGAAAAAAATTGGACACTATAACATGAAGTGCAGATGGGTTGTTAGCATCCCTGATAATCACGGAGGAATGGTTAACAATTCTGTGCATAGTAATAATTACCTCGGAAATGTCAGCATTATTGAGAATGAAGCTGTTCCTAAGTCAAATGTAGTCAAGTTTGAAGTGCAGCTCTACAAAACTCAGGAGAAATATCTGCTTGATCTTCAAAGGGTTGAGGGCCCCCAGTTTCTTTTCTTGGATCTTTGTGCCGCTTTCCTCGCACAGCTCCGTGTTCTCTATACTACTTTTCCACTACAGATTTTAAAAATGGAGGGATCAAATAGCAGTGGTGGGGAAAGTGTGGATTTGTATCTAAAAAATTATAAGTTGGGAAAGACACTTTGCAATTGGTCATTTGGCAAGGTGAAATTTGCAGAGCATGTATTGACTGGTCATAAAGTTTCCATTTATATCATTAATTGCCGTTGGACAAAGAACATACAAATGGAAGAAAAAGTTAGAAGAGAAATTAATATTTTAAAAATGTTAAGTCATCCTCACATAATACAAGTTTATGGGGTGGTAGAAACCTCAACAGAGATATATGTTATTATGGAGTACATGGAATTTGGAGAGCTTTTTGATTATATAGTAGAAAAGGGTAGGTTACAAGAAGATGAAGCTCGCAAATTTTTTCAGCAGATAATCTCTGGTGTGGAGTATTGTCACAACAATATGGTGGTTCATAGAGACTTAAAGGTTGAAAATATACTTTTGGACTCAAAATTAAATATCAAGATTAGTGATTTTGGCTTGAGCAACACTATACATTATGGTCAGTTATTTAAGACAAGTTGTGGAAGTGCTAACTATGCAGCTCCAGAGGTTATCTCTGGGAAATTATATGATGGACCTAAAGTAGATATTTGGAGTTGTGGTGTAATTTTATATGCTCTTCTATGTGGTTCTCTTCCTTTTGATGATGAAAACATTCCCATCCTCTACAAAAAAATAAAGGGTGGTATATACAGTCTTTCTAGTCATTTATCACCTGGTGCTAGTGATTTGATATCAATGATGCTTGAGGTGGATCCAATGAAGAGGATTACTATACTTGAAATACACCAACACCCTTGGTTCACTATTTCTCTGCCACATTATTTGGTAATGCCACCACAAGATACAATGCAACAAGCCAAAAAGGTATTAAAGTTGCAATCTTCTAACGGTATTGGAGATGAGGCGAAGCTTAAGGCATGTGCTGAAACATTTATAAGCTAA 2595 0.3919 MGFYTLSISFSYFNLRFLDYSLISKMDGTAGPGGSANGFLRNYKMGKTLGIGSFGKVKIAEHVLTRHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHHHIIRLYEVVETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARSFFQQQIISGVEYCHRNMVVHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRLLVVDPMKRMTIPEIRQHPWFQVRLPRYLAVPPPDTLQQAKKIDEEILQEVVNKGFDRNQLVESLSNRIQNEGTVTYYLLLDNRFRVSTGYLGAEFQETMDSGLNHVHSSEVASPVVGHRFSGYMDYQGVGTRQQFPVERKWALGLQSRAQPREIMAEVLKALQELNVCWKKIGHYNMKCRWVVSIPDNHGGMVNNSVHSNNYLGNVSIIENEAVPKSNVVKFEVQLYKTQEKYLLDLQRVEGPQFLFLDLCAAFLAQLRVLYTTFPLQILKMEGSNSSGGESVDLYLKNYKLGKTLCNWSFGKVKFAEHVLTGHKVSIYIINCRWTKNIQMEEKVRREINILKMLSHPHIIQVYGVVETSTEIYVIMEYMEFGELFDYIVEKGRLQEDEARKFFQQIISGVEYCHNNMVVHRDLKVENILLDSKLNIKISDFGLSNTIHYGQLFKTSCGSANYAAPEVISGKLYDGPKVDIWSCGVILYALLCGSLPFDDENIPILYKKIKGGIYSLSSHLSPGASDLISMMLEVDPMKRITILEIHQHPWFTISLPHYLVMPPQDTMQQAKKVLKLQSSNGIGDEAKLKACAETFIS 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00221 864 SUPERFAMILY Protein kinase-like (PK-like) 562 830 IPR011009 -
Car02g00221 864 PANTHER SERINE/THREONINE KINASE 555 834 - -
Car02g00221 864 Gene3D Kinase associated domain 1, KA1 420 535 - -
Car02g00221 864 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 555 834 - -
Car02g00221 864 SUPERFAMILY KA1-like 353 536 IPR028375 -
Car02g00221 864 CDD AMPKA_C 414 534 - -
Car02g00221 864 CDD STKc_AMPK_alpha 563 818 - -
Car02g00221 864 ProSitePatterns Protein kinases ATP-binding region signature. 49 72 IPR017441 GO:0005524
Car02g00221 864 Pfam Kinase associated domain 1 495 536 IPR001772 -
Car02g00221 864 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 317 357 IPR015940 -
Car02g00221 864 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 34 536 - -
Car02g00221 864 ProSiteProfiles Protein kinase domain profile. 566 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00221 864 Pfam Protein kinase domain 569 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00221 864 Pfam Protein kinase domain 43 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00221 864 SMART serkin_6 43 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00221 864 SMART serkin_6 566 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00221 864 PANTHER SERINE/THREONINE KINASE 34 536 - -
Car02g00221 864 SUPERFAMILY Protein kinase-like (PK-like) 40 309 IPR011009 -
Car02g00221 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 685 697 IPR008271 GO:0004672|GO:0006468
Car02g00221 864 ProSiteProfiles Protein kinase domain profile. 43 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00221 864 CDD UBA_SnRK1_plant 318 358 - -
Car02g00221 864 CDD STKc_AMPK_alpha 40 296 - -
Car02g00221 864 Gene3D Transferase(Phosphotransferase) domain 1 35 375 - -
Car02g00221 864 Gene3D Transferase(Phosphotransferase) domain 1 557 860 - -
Car02g00221 864 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 489 536 IPR001772 -
Car02g00221 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Car02g00221 864 SMART uba_6 319 356 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00221 Car-Chr2 2231685 2242132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00221 566 818 CBL-interacting serine-threonine protein kinases AT4G24400 49.606 1.23e-80 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Car02g00221 Pkinase 1.8e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00221 K07198 - gmx:547544 926.391