Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00220 ATGGCTAGGAAGAGAAAAATTGTTGAAGTAGAAGAGAGAAATATATGTGATGGAAGCATAGTTTGGGATGAGATGATGAAAGAAGCTGCATCACTCGAAGGATCGAGGCGAACGCGAAAGCGATTCGTTGGTGTTAGGCAAAGGCCATCAGGTAGATGGGTAGCTGAGATCAAAGATACCATTCAAAAGATAAGAGTTTGGTTAGGAACATTTGATACAGCTGAAGAAGCTGCAAGAGCTTATGATGAGGCTGCTTGTTTGCTTCGAGGTGCGAACACTCGAACAAATTTTTGGCCTTGTTCTCAATCTTCAACTAGTCCTGCTCTTTCTTCAAAGATCACTAATCTCCTACTTCAAAGGCTCAGAGAAAGGAATATGAATAACTCTTATTCTTCGTTTTCTTCCTCAACTTGTTCCACTTCACTTATGATCAGTGACCTGATCAGGAGTTCAGGGGAGCATCAGGAGCAACAACAGACTAATGATCAGGACCAGGACCATCTGGTCCCGATGCAACAAGTAGATGTGTATGGAGATGGTTTGAAAGATTTCTCAATTGATCAATTCACCAATTTCCTTAATGATAACGAAGATTATAGCGCAAGCAACCATGATATCATCAATGACACTGCACAATTTGATTACATTTCGAGTAGTTTCGAGTCTTGTTTAACCGAAAAGGATGGCTGCAATAAGGCGGATGATATGGATATGGAATACAACAACAACAAATCAAACAATGTGACACAAACTTCAAGTGGTGATAGCAATTCATCAAGTGAAGAAGGAGAAGAAGGCAATGATTTTGATGTTCCGGATTTTCGATTTCTCGACAATATAGCTCCATCTAGTAGTTACTACTCACCTTTTGAGATTGCTGAAGAGATGGAGGAACCAGTGGAGGCAGAGAATTTAGGTGATGAGCCTTCAATGCTAAGAAATGTGATGAAAAGAATGAAATATGAGAGAAAATTTTCAGCTTCTCTTTATGCATTCAATGGAATACCTGAATGTTTGAAGTTGAAACTTGAATCAGGAAACACAAATGGAAGAGGAAATATAACTGATCAATTAATTACAAATCTTCAAGCATCATGTAGCAAAAACAGAATTgaaaagaaaaagaagaagaagaatgaggatgagaaaatggaagaaAATCATGAAACATCAAATGAAATGGAAAGTTCTTCTTTGTCAAGTAATGATGGAGATCTTTTCCTATGGAATTCACTTGATCTTCCTCCTATTTGCTTTGTTAACTTACTTGAAAATGGTTCATTCAATTAG 1290 0.3659 MARKRKIVEVEERNICDGSIVWDEMMKEAASLEGSRRTRKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAACLLRGANTRTNFWPCSQSSTSPALSSKITNLLLQRLRERNMNNSYSSFSSSTCSTSLMISDLIRSSGEHQEQQQTNDQDQDHLVPMQQVDVYGDGLKDFSIDQFTNFLNDNEDYSASNHDIINDTAQFDYISSSFESCLTEKDGCNKADDMDMEYNNNKSNNVTQTSSGDSNSSSEEGEEGNDFDVPDFRFLDNIAPSSSYYSPFEIAEEMEEPVEAENLGDEPSMLRNVMKRMKYERKFSASLYAFNGIPECLKLKLESGNTNGRGNITDQLITNLQASCSKNRIEKKKKKKNEDEKMEENHETSNEMESSSLSSNDGDLFLWNSLDLPPICFVNLLENGSFN 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00220 429 MobiDBLite consensus disorder prediction 370 401 - -
Car02g00220 429 MobiDBLite consensus disorder prediction 235 272 - -
Car02g00220 429 CDD AP2 40 97 IPR001471 GO:0003700|GO:0006355
Car02g00220 429 MobiDBLite consensus disorder prediction 240 260 - -
Car02g00220 429 SMART rav1_2 41 104 IPR001471 GO:0003700|GO:0006355
Car02g00220 429 Gene3D AP2/ERF domain 40 98 IPR036955 GO:0003700|GO:0006355
Car02g00220 429 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Car02g00220 429 PRINTS Ethylene responsive element binding protein signature 64 80 IPR001471 GO:0003700|GO:0006355
Car02g00220 429 SUPERFAMILY DNA-binding domain 41 98 IPR016177 GO:0003677
Car02g00220 429 ProSiteProfiles AP2/ERF domain profile. 41 98 IPR001471 GO:0003700|GO:0006355
Car02g00220 429 PANTHER AP2/ERF DOMAIN TRANSCRIPTION FACTOR 3 353 - -
Car02g00220 429 MobiDBLite consensus disorder prediction 374 392 - -
Car02g00220 429 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 3 353 - -
Car02g00220 429 Pfam AP2 domain 41 90 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00220 Car-Chr2 2226584 2227983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00220 33 117 AP2-EREBP Transcription Factor Family AT5G19790 70.588 2.54e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car02g00220 AP2 8.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00220 K09286 - gmx:100790398 491.5