Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00215 ATGGCACCTTTTATATTGACAGTGTCACAAGATGGAACAGGAAACTACAGAACAGTACAGGAAGCCATTGATGCAGTTCCATTTGGAAACACTCGCCGGACGGTGATAAAGGTGTCGCCGGGAATATACCGGCAACCACTTTACGTGGCAAAGACTAAAAACTTCATCACTTTTGTTGGTTTGTGTCCTGAGGATACTGTTCTCACGTGGAATAACACTGCCAACAAAATTGATCACCACCAAGGTTCTAAGGTGATAGGGAATGGAACCTTTGCATGTGGTAGTACCATTGTGGAAGGGGAGGACTTCATTGCTGAGAATATTACGTTTGAGAATTCTTCTCCTGAGGGTTCAGGACAAGCAGTGGCAGTTAGAGTATCAGCAGATCGATGTGCATTCTATAATTGCAGGTTCCTTGGATGGCAGGACACACTGTATCTACATTCTGGCAAACAATATTTGAGAGATTGTTATATTGAAGGAAGTGTGGACTTCATTTTTGGTAATAGCACTGCACTCTTGGAGCATTGTCATATTCACTGCAAGTCACCAGGGTTCATAACTGCACAGAGCAGAAAATCTCAACATGAAAAAACTGGTTATGTATTCCTAAGGTGTGTTATCACAGGCAATGGGGGAACTTCATATGCATATCTTGGAAGGCCATGGGGACCTTATGGAAGAGTGGTCTTTGCATTTACTTATATGGATCAATGTATAAAGCCTGCTGGTTGGAATAATTGGGGGAAAGTTGAGAATGAAAGAACTGCTTGCTTCTATGAATATAGGTGTTTTGGAGCAGGTTTTTGTCCATCCAAAAGGGTGAAATGGGCGAGAGTGTTAAAGGATAAAGAAGCTGAACAGTTTCTCATGCATAGCTTCATTGATCCTGAACCACAAAGACCTTGGCTTGATCAAAGATTGGCCTTAAGAATTCCATATTCTGCTTAG 951 0.4196 MAPFILTVSQDGTGNYRTVQEAIDAVPFGNTRRTVIKVSPGIYRQPLYVAKTKNFITFVGLCPEDTVLTWNNTANKIDHHQGSKVIGNGTFACGSTIVEGEDFIAENITFENSSPEGSGQAVAVRVSADRCAFYNCRFLGWQDTLYLHSGKQYLRDCYIEGSVDFIFGNSTALLEHCHIHCKSPGFITAQSRKSQHEKTGYVFLRCVITGNGGTSYAYLGRPWGPYGRVVFAFTYMDQCIKPAGWNNWGKVENERTACFYEYRCFGAGFCPSKRVKWARVLKDKEAEQFLMHSFIDPEPQRPWLDQRLALRIPYSA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00215 316 Gene3D - 5 309 IPR012334 -
Car02g00215 316 Pfam Pectinesterase 7 296 IPR000070 GO:0030599|GO:0042545
Car02g00215 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Car02g00215 316 PANTHER PECTINESTERASE 1 315 - -
Car02g00215 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 315 - -
Car02g00215 316 SUPERFAMILY Pectin lyase-like 3 303 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00215 Car-Chr2 2183685 2187226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00215 5 309 Carbohydrate Esterase AT5G47500 37.539 3.92e-68 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00215 K01051 - gmx:100810259 573.163