Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00210 ATGGAAGGAGAAGGATCATTATCATTTGTTAGAAAAGGAGCTTGGAATAAAATGGAAGATGAACTTCTCACTACTTGTGTACAACAATATGGAGAAGGAAAATGGCACCTTGTGCCCATAAGAACAGGGTTGAACAGATGTCGCAAAAGCTGTAGATTGAGGTGGTTGAATTATTTAAAACCAAGTATCAAGAGAGGAGAATTCACTGAGGACGAAGTTGACATGATGAAAAGATTGCATAGACTCTTGGGAAACAGGTGGTCCCTGATCGCTGGAAGACTTCCTGGAAGAACACCTAATGATGTGAAAAATTACTGGAATACCCATATCCATAAAAAGGTATCATCATCTCATAAGGAAGAGTACTCTACATGTGCAAAGTCAAAAAAGGAAATAATCAAACCTCATTTAGTCATAAAACCCCAACCTCGAAATTTCTCAACCACTAATTCAACCATGTTGAAAATGAGGTTCCTTAATGAAGATCAAAGTGGGGCCAAAAATTCTCAAGCATGTGATGATACTTTAATAACAAAGTACAATGATAATAATTTAGATGATAAGTGGTGGGTGGGATCAACTATGATGGATGATGACAAAGGATGCAATGTTGGTGTGAATAATGATTTATGTTGTGTCCAAGATGGGATGCTCATGAAAGACCTTAAATTGAATGATGAGATTATAAAAGGTCTTTTAGAAGATCAAAGTTGGAGTGATTTTCTTATTGATATCAATTTTTTGGATTTGTAA 753 0.3572 MEGEGSLSFVRKGAWNKMEDELLTTCVQQYGEGKWHLVPIRTGLNRCRKSCRLRWLNYLKPSIKRGEFTEDEVDMMKRLHRLLGNRWSLIAGRLPGRTPNDVKNYWNTHIHKKVSSSHKEEYSTCAKSKKEIIKPHLVIKPQPRNFSTTNSTMLKMRFLNEDQSGAKNSQACDDTLITKYNDNNLDDKWWVGSTMMDDDKGCNVGVNNDLCCVQDGMLMKDLKLNDEIIKGLLEDQSWSDFLIDINFLDL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00210 250 ProSiteProfiles Myb-like domain profile. 60 110 IPR001005 -
Car02g00210 250 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 114 IPR017930 -
Car02g00210 250 PANTHER TRANSCRIPTION FACTOR MYB113-RELATED 10 168 - -
Car02g00210 250 SMART sant 11 61 IPR001005 -
Car02g00210 250 SMART sant 64 112 IPR001005 -
Car02g00210 250 ProSiteProfiles Myb-like domain profile. 11 59 IPR001005 -
Car02g00210 250 CDD SANT 67 110 IPR001005 -
Car02g00210 250 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 10 168 - -
Car02g00210 250 CDD SANT 14 59 IPR001005 -
Car02g00210 250 SUPERFAMILY Homeodomain-like 11 106 IPR009057 -
Car02g00210 250 Pfam Myb-like DNA-binding domain 12 59 IPR001005 -
Car02g00210 250 Pfam Myb-like DNA-binding domain 65 109 IPR001005 -
Car02g00210 250 Gene3D - 66 136 - -
Car02g00210 250 Gene3D - 12 64 - -
Car02g00210 250 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 59 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00210 Car-Chr2 2154811 2156906 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00210 10 151 MYB Transcription Factor Family AT1G66370 63.158 6.48e-59 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car02g00210 Myb_DNA-binding 3.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00210 - K09422 cam:101494325 522.702