Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00207 ATGATGGATGCAATGGAGAAAAAATCAAGAGATCTAGAAAGTGATGAAAAATTTGAATTGCCACCTGGATTTAGGTTTCATCCAACAGATGAAGAACTCATAACTCATTATCTCTCTCAAAAGGTTCTTAATAGTTGTTTTTGTGCTATAGCCATTGGAGAAGCTGATTTAAACAAGTGTGAACCTTGGGATTTGCCTTGGAGGGCCAAAATGGGTGAGAAAGAGTGGTATTTTTTCTGTGTTAGGGATAGAAAATATCCAACTGGCCTAAGGACAAATAGGGCTACATGTGCTGGATATTGGAAAGCAACTGGAAAAGACAGAGAAATATTTAGAGAGAAGACACTAATTGGAATGAAGAAAACTCTTGTTTTTTACAAAGGAAGAGCTCCAAAAGGTGAAAAAACAAATTGGGTCATGCATGAATATAGATTAGAGGACAAATATTCTTTACAAAATACATCCAAAAGGACTATGAAGGAGTGGTCTATTTGTAGAGTTTTTGAGAAGAGTTCTTGTGGAAAGAAAATGCATATTCAAGATTTGGTAAGGTTCAATTCAATTGGAAAAGAATTACCTCCTTTGATGGATTCTTCTCCAAACAATAGTGAATTAAAAAGTACTATTGGAGATTCATCACATGTGACATGTTTCAATCAAAATCTAATTGAGGATTCTCAAAGGATACAAAATGATAACATAATTGATAGTTTTGAAAGTCCTATTTTAACATCTTCATATTCATATTCTTCTAACCCTTATGATAATAATATTTCCTCTGCTTCATGGACACAAAATTTGTCACACCAATCAACACAAGTTGTGAATTCAAAATCTTCAGATTGTTTTATGGTTCAAGAACAATCCATGTTGAGGATGTTGATTGAAAATCATGGAACAAGTACAAAGACAAAATTTGAGAAAGATCAAGAATGTGATTTTGATGTTGACATTTCATCTATGATATACAACAATGAAATGTTTCAAGTGAATCAAGAATATTCAATAGGACATTTGGACAATGGTTTCTTATGGAATTTCTGA 1044 0.3266 MMDAMEKKSRDLESDEKFELPPGFRFHPTDEELITHYLSQKVLNSCFCAIAIGEADLNKCEPWDLPWRAKMGEKEWYFFCVRDRKYPTGLRTNRATCAGYWKATGKDREIFREKTLIGMKKTLVFYKGRAPKGEKTNWVMHEYRLEDKYSLQNTSKRTMKEWSICRVFEKSSCGKKMHIQDLVRFNSIGKELPPLMDSSPNNSELKSTIGDSSHVTCFNQNLIEDSQRIQNDNIIDSFESPILTSSYSYSSNPYDNNISSASWTQNLSHQSTQVVNSKSSDCFMVQEQSMLRMLIENHGTSTKTKFEKDQECDFDVDISSMIYNNEMFQVNQEYSIGHLDNGFLWNF 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00207 347 ProSiteProfiles NAC domain profile. 20 170 IPR003441 GO:0003677|GO:0006355
Car02g00207 347 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 313 - -
Car02g00207 347 Gene3D NAC domain 29 174 IPR036093 GO:0003677|GO:0006355
Car02g00207 347 Pfam No apical meristem (NAM) protein 21 145 IPR003441 GO:0003677|GO:0006355
Car02g00207 347 PANTHER NAC DOMAIN-CONTAINING PROTEIN 92-LIKE 14 313 - -
Car02g00207 347 SUPERFAMILY NAC domain 16 170 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00207 Car-Chr2 2094689 2096665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00207 19 298 NAC Transcription Factor Family AT5G07680 55.830 6.79e-106 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car02g00207 NAM 2.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00207 - - gmx:100785620 448.358