Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00181 ATGGCTGGTCCCTTTGTTGCTACTAAGGTTGGAAGGGTTAGAAAAGTTGACCAAAAGAAGGGAAAAAACACCAACAACAACAAACGTGTGAAACGTGGAGAAAATTCTGGAATTTGGAAGAAACTCAAGGTTTTATTTACTTGCATGTCCAAAGCTGAAAGATCCTCTCGTATAAAGAAAAACATAGATGATGAGATGCTTAGTGTTGGTGGTCCAAAATCACAAAGAAAGAGTAACTCAAGAATCTCAAGATCACTAATTCAAAGTGAAATAAATAACTATTCTCACCTAAAACAATACACATATCGTGAATTAGTGATAGCAACAAGAAATTTCAGAAGAGAGTATTTTCTTGGTGAAGGAGGGTTTGGAACAGTGTTCAAAGGTTGGATAAATCGTGATGATAACTCCCCTTCAAGACCTGGATTAGGGCTACCAGTTGCTGTCAAGACTCTCAATAGGGAAGGCTCTCAAGGGCATAAGGAATGGATGGCTGAAGTTAAGCATCTAGGTGCCCTCCAACATCCAAATTTGGTTAAACTTTTTGGTTATTGCATTGAAAGAGAACATAGGCTTCTTGTTTATGAATTTCTACCTAGAGGGAGCCTAGAAAATCATCTTTTTAAGAGATTAGCTAGACCTCTTCCATGGGCTGTGAGAATGAAAATTATGCTTGGTGCTGCAAAAGGGCTTGCATTTCTACATGAAGAAGCTAAAAAGCCACTAATCTATAGAGACTTCAAAACTTCTAATATCCTTTTGGATGGGGAATATAATGCAAAACTTTCTGATTTTGGACTTGCCAAAGATGCTCCAGATGGAGACAAGACTCATGTGTCAACTCAAGTGATGGGAACACAAGGATATGCAGCTCCTGAGTATGTAATGACAGGACACCTTACATCAAAGAGCGATGTGTATAGCTTCGGCGTGGTTCTTCTAGAGGTGTTAACGGGGCGAAAAGCCATGGATAAAAGGCTGGCGCATAGAGAGCAAAGTCTAGTGGAATGGGCAAAACCATACTTAAAATCTAGAGGAGGATTCTATCAATTAATGGACCCAAGACTTGAAGGACAATACTCAGCAAGAGGTGCATACAAAGCAACAAAGATAGTTACACATTGTCTTTACCGTGACCAAAAAGCAAGACCTTTAATGAGTGAAATTGTTAAGCTTCTCAAAAGACTTCCTGATTACAATAATGACATGCCTTGTTCGCCGTTACCACCACCACCATTATTGTCTAAAGACTTGCAAGTTGGTCCGTCATCTTCTAGTTCTTCTAGACATGGAGGTGGTGGTGGCAATGGTACTAATAAATATGATCTCAAAGTTTGTTCGTCATCTTCAGCTTCATCTACAATGAGTACTCCAACTCAATTTTATGCTTCTCCCTTGAAGTGTACTCCCCATTTTCTTTCACCAAATTCTTGTGGTGGAAATCCATGA 1449 0.3941 MAGPFVATKVGRVRKVDQKKGKNTNNNKRVKRGENSGIWKKLKVLFTCMSKAERSSRIKKNIDDEMLSVGGPKSQRKSNSRISRSLIQSEINNYSHLKQYTYRELVIATRNFRREYFLGEGGFGTVFKGWINRDDNSPSRPGLGLPVAVKTLNREGSQGHKEWMAEVKHLGALQHPNLVKLFGYCIEREHRLLVYEFLPRGSLENHLFKRLARPLPWAVRMKIMLGAAKGLAFLHEEAKKPLIYRDFKTSNILLDGEYNAKLSDFGLAKDAPDGDKTHVSTQVMGTQGYAAPEYVMTGHLTSKSDVYSFGVVLLEVLTGRKAMDKRLAHREQSLVEWAKPYLKSRGGFYQLMDPRLEGQYSARGAYKATKIVTHCLYRDQKARPLMSEIVKLLKRLPDYNNDMPCSPLPPPPLLSKDLQVGPSSSSSSRHGGGGGNGTNKYDLKVCSSSSASSTMSTPTQFYASPLKCTPHFLSPNSCGGNP 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00181 482 Gene3D Transferase(Phosphotransferase) domain 1 198 404 - -
Car02g00181 482 MobiDBLite consensus disorder prediction 404 440 - -
Car02g00181 482 PANTHER OS01G0588500 PROTEIN-RELATED 70 453 - -
Car02g00181 482 MobiDBLite consensus disorder prediction 418 434 - -
Car02g00181 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Car02g00181 482 ProSiteProfiles Protein kinase domain profile. 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00181 482 PANTHER TYROSINE KINASE FAMILY PROTEIN 70 453 - -
Car02g00181 482 SUPERFAMILY Protein kinase-like (PK-like) 94 415 IPR011009 -
Car02g00181 482 Pfam Protein tyrosine and serine/threonine kinase 117 393 IPR001245 GO:0004672|GO:0006468
Car02g00181 482 ProSitePatterns Protein kinases ATP-binding region signature. 118 150 IPR017441 GO:0005524
Car02g00181 482 Gene3D Phosphorylase Kinase; domain 1 72 197 - -
Car02g00181 482 CDD STKc_IRAK 118 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00181 Car-Chr2 1720588 1725848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00181 72 430 Glycoside Hydrolase AT3G07070 46.703 5.27e-107 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car02g00181 PK_Tyr_Ser-Thr 4.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00181 - - mtr:MTR_3g462840 533.102