Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00167 ATGGGGTGTGTGAATAGCAATGCAATTAAAGCAGGAAGTTTAGATGTTGACAAGTCAAAGGAAAACAAGAAGGTTGATGTTGCAAAGAAGAAGAGAAGATGGTGCTTTAGATTCAGTTTTATTGGAATCTGCATACCTTCAAGATCAAAATTTAATATCTCAACATGTGGCACTGCCACTACTAGTAACCATATTGGTGATAATAATACCAAGTCAGTAATAATTCAATCAGAGGAAAACAAATCTACATCTGAAACAAACACAAAGGGATCAAATGGCATTGCAAGTTCCTCTACAACAACTAGTAATGAGGAAAGTATCTTTTCAACTTCAAAATTCAGTGAGGAGTTGAAAGTTGCTTCTTGTTTGAGAAAATTCACATTCAATGGACTTAAAGTTGCAACTAGGAATTTCAGACCAGAGAGTCTTCTAGGTGAGGGAGGTTTTGGTTGTGTCTTCAAAGGTTGGATTGAGGAGAATGGAACTGCGCCTGTTAAACCGGGAACCGGACTTACTGTTGCTGTCAAGATCCTTAATCACAATGGACATCAGGGTCACAAAGAATGGCTTGCTGAATTAAACTATCTTGGTAATCTTGTCCATCCTAATCTTGTTAAATTGGTAGGTTTCTGTATTGAAGATGATCAAAGATTGTTGGTTTACGAGTTTATGCCACGAGGAAGCTTGGAGAATCATCTCTTTAGAAGGCCCTTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTCGGTGCTGCAAAAGGTCTCGCTTTTCTCCACGAAGAAGCTGATAGGCCTGTGATATATCGCGATTTCAAGACATCTAATATTCTATTAGATGCGGAATACAACGCGAAGCTTTCTGATTTTGGACTTGCAAAAGACGCTCCTGAGGGCGAAAAAACACACGTTTCAACACGAGTTATGGGAACGTATGGTTATGCTGCTCCGGAATATGTGATGACTGGACATTTGTCATCAAAAAGTGATGTCTATAGCTTTGGAGTAGTCCTACTTGAAATGCTCACTGGACGACGATCTATTGACAAGAAAAGACCAAATGGTGAACACAATCTAGTGGAATGGGCAAGACCTGTACTTGGAGACAGGAGGACATTCTACCGAATAATCGATCCACGCCTCGAAGGTCATTTCTCAGTTAAAGGAGCACAGAAAGCAGCATATGTGGCTGCTCAATGCCTTAGCCGCGATCCAAAATCTCGACCTCTAATGAGTGAAGTTGTTCAAACTTTAAAGCCATTGCCTGCCCTTAAGGATATGGCCATATCATCTCATCAGTTCCAGGTCGCACGCGTCGATCGAACCATGTCAATGCCTAATCCTAAAAATGGTATTAGAACAGGTTTAGCTTCTTTACCAAAAAAGGGTCAGCCTGTAAGAGCATTGTCAAGTTCAAATTATGGACACAGTTCGCCATATCCTCGCTATAGTAAGTCTCCGAAACCTATTGCATAA 1476 0.4065 MGCVNSNAIKAGSLDVDKSKENKKVDVAKKKRRWCFRFSFIGICIPSRSKFNISTCGTATTSNHIGDNNTKSVIIQSEENKSTSETNTKGSNGIASSSTTTSNEESIFSTSKFSEELKVASCLRKFTFNGLKVATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKILNHNGHQGHKEWLAELNYLGNLVHPNLVKLVGFCIEDDQRLLVYEFMPRGSLENHLFRRPLPLPWSIRMKIALGAAKGLAFLHEEADRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDAPEGEKTHVSTRVMGTYGYAAPEYVMTGHLSSKSDVYSFGVVLLEMLTGRRSIDKKRPNGEHNLVEWARPVLGDRRTFYRIIDPRLEGHFSVKGAQKAAYVAAQCLSRDPKSRPLMSEVVQTLKPLPALKDMAISSHQFQVARVDRTMSMPNPKNGIRTGLASLPKKGQPVRALSSSNYGHSSPYPRYSKSPKPIA 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00167 491 MobiDBLite consensus disorder prediction 78 101 - -
Car02g00167 491 ProSiteProfiles Protein kinase domain profile. 138 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00167 491 Pfam Protein tyrosine and serine/threonine kinase 142 418 IPR001245 GO:0004672|GO:0006468
Car02g00167 491 MobiDBLite consensus disorder prediction 443 491 - -
Car02g00167 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Car02g00167 491 PANTHER OS01G0588500 PROTEIN-RELATED 68 483 - -
Car02g00167 491 SUPERFAMILY Protein kinase-like (PK-like) 116 418 IPR011009 -
Car02g00167 491 Gene3D Phosphorylase Kinase; domain 1 122 223 - -
Car02g00167 491 PANTHER RECEPTOR-LIKE KINASE PLANT 68 483 - -
Car02g00167 491 ProSitePatterns Protein kinases ATP-binding region signature. 144 176 IPR017441 GO:0005524
Car02g00167 491 CDD STKc_IRAK 144 421 - -
Car02g00167 491 Gene3D Transferase(Phosphotransferase) domain 1 224 441 - -
Car02g00167 491 MobiDBLite consensus disorder prediction 465 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00167 Car-Chr2 1628711 1632756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00167 93 430 Glycoside Hydrolase AT3G07070 52.035 7.80e-114 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car02g00167 Pkinase 4.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00167 - - gmx:100499647 770.77