Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00163 ATGGATATCAACAAAGAAGGTTCAAATAAGGCTTGTGCTTCTTGCAAATACCAAAGAAGAAAGTGTACTAAAGAATGTCCTTTAGCTCCTTATTTTCCAATTAATAAATCAAAAAGCTTCATCAACGTTCATCGTTTGTTTGGAGTTTGCTACATTTTAAAATTGTTAAATCGCATCGATGATGATAAAAAAGATGAGGCAATGACATCAATAATTTTTGAATCAAACATTCGTGCTAAATTCCCAATTCATGGATGTGTCGGTGTTATTAATATCCTTCAAGAAGAAGTAATGAAAACTAACTGCGGTGATGTGGATGCACCAAGTGCAACTGAGGAATTTAATGCACAACATCCATTGAATATGCAACAAGATGCACCTAAATCCAGTTTGGGATTAACTGATCAAGACCTTTGA 417 0.3405 MDINKEGSNKACASCKYQRRKCTKECPLAPYFPINKSKSFINVHRLFGVCYILKLLNRIDDDKKDEAMTSIIFESNIRAKFPIHGCVGVINILQEEVMKTNCGDVDAPSATEEFNAQHPLNMQQDAPKSSLGLTDQDL 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00163 138 MobiDBLite consensus disorder prediction 119 138 - -
Car02g00163 138 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Car02g00163 138 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 100 - -
Car02g00163 138 Pfam Lateral organ boundaries (LOB) domain 11 101 IPR004883 -
Car02g00163 138 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 8 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00163 Car-Chr2 1565729 1566942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00163 5 94 AS2 family AT3G47870 57.778 6.83e-35 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car02g00163 LOB 1.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00163 - - cam:101493950 155.606