Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00140 ATGGGTGGTGGTGATCACAAAAATGTTTCCATTGTTAGCAAGAAGAAAAAGAAAAATGGATCTTTTAAATCCATTTTCATGCATGCTGATGTTTTAGATTGGTTTTTCATGGTTTTTGGTTTGCTTGGTGCAATTGGTGATGGCATAATGACACCTTTGGTGTTGTTTATCACAAGCAAAATTATGAACTCTCTTGGTGGTAGTTCTACCACAACAAGCAACAATTTTATTCATAACATCAATAAGAATGCAGTTATTATGCTATATTTGGCTTGTGTTTCTTTTGTAGCTTGTTTTCTAGAGGGTTATTGTTGGACAAGAACAGGTGAAAGACAAGCTGCAAGAATGAGAGCTAGGTACTTAAAAGCAATTCTTAGACAAGAAGTTGCATTCTTTGATTTACATGTTACAAGCACATCAGAAGTTATCATCAGTGTCTCAAATGACAGCCTAGTAATTCAAGATGTTCTTAGTGAAAAGGTCCCAAATTTTTTGATGAATGCATCTATGTTCATTGGGAGCTACATAGTAGCATTTGCATTGTTATGGAAACTTGCCATTGTTGGTTTCCCTTTTGTGCTTCTACTTGTGATTCCTGGTCTCATGTATGGAAGAACTTTGATGGATTTAGCTAGAAAAATCAAAGAAGAGTATAATGAAGCTGGCACAATAGCAGAACAAGCAATATCTTCCATAAGAACTGTTTATTCCTTTGTTGGTGAAAGCAAAACCATTGATGCTTTCTCTAATGCTTTACAAGGATCAGTTAAGTTAGGATTGAAACAAGGCTTAGCTAAAGGATTAGCCGTAGGAAGCAATGGTGTTGTTTTTGCAATTTGGTCTTTTATGTCTTTTTATGGTAGCAGACTGGTTATGTATCATGGTGCTAAAGGTGGTACTGTCTTTGCAGTTGGAGCTTCTATTGCACTTGGTGGATTGGCTTTAGGAGCTGGTTTATCCAATATAAAATATTTCTCAGAAGCAAGTGTTGCAGGAGAAAGAATACTGGAAATGATAAATAGAGTTCCAAAGATAGATTCTGAAAACATGGAAGGAGAGGTTATAGAGAAAGTATTGGGAGAAGTTGAATTTAAGAATGTTGAATTTGTGTATCCATCAAGACCAGAGAGTGTGATCTTACATGATTTTTGTCTAAAAGTTCCATCAGGTAAAACATTGGCATTAGTAGGAGGAAGTGGTTCTGGAAAATCAACTATTGTATCACTTTTGCAAAGATTTTATGATCCAATTAGTGGAGAGATATTTGTTGATGGAATTTCTATTCATAAGTTGCAACTTAAATGGCTTAGATCTCAAATGGGATTAGTAAGTCAAGAACCTGCATTATTTGCAACAAGTATTAAGGAGAATATACTTTTTGGAAGAGAGGATGCTACTTATGAAGAAATTGTGGAAGCTTCTAAAGCTTCTAATGCTCATGATTTCATTTCAAAATTGCCACAAGGATATGATACTCAGGTTGGGGAGAGGGGAGTTCAAATGTCAGGAGGACAAAAGCAAAGGATTGCGATTGCAAGAGCCATAATTAAAATGCCAAAAATTCTATTGCTAGATGAAGCAACAAGTGCACTTGATTCTGAATCTGAACGAATTGTTCAACAAGCTCTAGACAAAGCTGCAATTGGACGAACCACCATCATCATCGCTCATCGTTTATCCACTATTCGAAACGCAGATATCATTGCCGTCGTTCAAAACGGCAACATCGCCGAAACTGGATCTCATCAAACCCTTATTCAAAACGACAATTCTATTTACACCTCCCTCGTTCGTCTCCAACAAACTAAAAGTGATCAAAACGACGACGTTCCTTCTATCATTAATAGAGACCACGTGCGAAACACGAGTAGTGGTAGTACTCTCGTCAGTCGTTCAAGTTCTTTTAACTCAATGACACGTGGCAATGATGATATTGTTCTTCCtaataataataataataaCCAAGTTGTTGAAGAAATTGTtaataaaaataataataataataataataataaaataGAGGTTCCTTCTTTTAGAAGGTTATTGGCAATGAATGTGCCAGAGTGGAAGCAAGGATGTTTGGGGTGTTTAAATGCGGTTTTATTCGGTGCGGTTCAACCCGTATATGCATTTTCAATGGGGTCGGTTATATCGGTTTATTTTTTGGATGACCATGATGAGATCAAGAAGCAAATTAGGATTTATTCACTTTGTTTTCTAGGATTAGCTTTGTTCTCAATGATTGTAAATGTGCTTCAACATTATAGTTTTGCTTATATGGGAGAGTATTTGACAAAGAGAGTTAGAGAAAGAATGCTTTCTAAAATACTCACTTTTGAAGTTGGATGGTTTGATGAGGATCAAAATTCTTCAGGTGCTATTTGCTCTAGACTTGCCAAAGAAGCCAATGTGGTAAGGTCTTTGGTGGGTGATAGATTGGCTTTAGTGGTACAAACCATATCAGCAGTGGTAATAGCATTCACAATGGGACTAGTAATTGCATGGAGGCTAGCCATTGTTATGATAGCAGTTCAACCAATTATCATATGTTGTTTCTATACAAGAAGGGTTCTTCTTAAAGAAATGTCAAGTAAATCCATTAAGGCCCAAGATGAAAGTAGTAAAATAGCTGCTGAAGCTGTTTCAAATCTAAGAACCATCACTGCTTTTTCATCTCAAGATAGAATCCTGAAAATGCTTGAAAAAGCCCAACAAGGCCCAAGTCATGAAAGCATTAAACAATCTTGGTATGCAGGTATTGGGCTTGCATGTTCACAAAGCATCAATTTTTGTGCTTGGGCTTTGGACTTTTGGTATGGTGGAAAACTTGTGTCTCAAGGTTATATTACTGCGAAGGCATTATTTGAGACTTTTATGATTTTGGTAAGCACTGGAAGAGTTATTGCTGATGCTGGTAGCATGACTACTGATCTTGCTAAAGGTTCTGATGCTGTTGGATCAGTTTTTGCAATCCTTGATAGATATACTAAAATTGAGCCTGATGATTTAGAAGGTTACAAAGGTGAAAAGTTGGTAGGAAAAATTGAACTTCATGATGTACATTTTTCATATCCAGCTAGGCCTAATGTAATGATCTTTGAAGGATTCTCAATTAAAATTGATGCCGGAAAATCTACGGCTTTGGTTGGTCAGAGTGGTTCTGGAAAATCAACAATCATAGGACTAATTGAGAGATTTTATGATCCACTTAAAGGAATAGTGACAATAGATGGTAGAGATATAAAGTCTTATCATTTAAGGTCATTAAGGAAACACATTGCACTTGTGAGTCAAGAGCCAACATTGTTTAGTGGTACTATAAGAGAAAATATTGCATATGGAGCATGTGAGAAAGTTGATGAGAGTGAGATTATAGAGGCTGCAAGGGATGCTAATGCTCATGATTTTATATCAAGCTTAAAAGATGGTTATGAAACATGGTGTGGTGACAGAGGAGTTCAACTTTCTGGTGGTCAGAAACAAAGAATTGCAATAGCCAGAGCTATATTGAAGAATCCAGAGGTGTTGCTTCTTGATGAAGCAACAAGTGCACTTGATAGTCAATCAGAGAAATTAGTGCAAGATGCTTTGGAAAGGGTTATGGTTGGAAGGACAAGTGTGGTTGTGGCTCATAGGTTGAGTACTATACAAAATTGTGATTTGATTGCTGTTTTAGATAAGGGAACTGTTGTGGAAAAAGGAACACATTCATCTTTGTTGGCTAAGGGATCAAGTGGAGCTTATTACTCTTTGGTCAGTTTACAAAGAAGACCAACCAACATAATTGTTGATTCTTCAAATGAAATCAACTAA 3813 0.3627 MGGGDHKNVSIVSKKKKKNGSFKSIFMHADVLDWFFMVFGLLGAIGDGIMTPLVLFITSKIMNSLGGSSTTTSNNFIHNINKNAVIMLYLACVSFVACFLEGYCWTRTGERQAARMRARYLKAILRQEVAFFDLHVTSTSEVIISVSNDSLVIQDVLSEKVPNFLMNASMFIGSYIVAFALLWKLAIVGFPFVLLLVIPGLMYGRTLMDLARKIKEEYNEAGTIAEQAISSIRTVYSFVGESKTIDAFSNALQGSVKLGLKQGLAKGLAVGSNGVVFAIWSFMSFYGSRLVMYHGAKGGTVFAVGASIALGGLALGAGLSNIKYFSEASVAGERILEMINRVPKIDSENMEGEVIEKVLGEVEFKNVEFVYPSRPESVILHDFCLKVPSGKTLALVGGSGSGKSTIVSLLQRFYDPISGEIFVDGISIHKLQLKWLRSQMGLVSQEPALFATSIKENILFGREDATYEEIVEASKASNAHDFISKLPQGYDTQVGERGVQMSGGQKQRIAIARAIIKMPKILLLDEATSALDSESERIVQQALDKAAIGRTTIIIAHRLSTIRNADIIAVVQNGNIAETGSHQTLIQNDNSIYTSLVRLQQTKSDQNDDVPSIINRDHVRNTSSGSTLVSRSSSFNSMTRGNDDIVLPNNNNNNQVVEEIVNKNNNNNNNNKIEVPSFRRLLAMNVPEWKQGCLGCLNAVLFGAVQPVYAFSMGSVISVYFLDDHDEIKKQIRIYSLCFLGLALFSMIVNVLQHYSFAYMGEYLTKRVRERMLSKILTFEVGWFDEDQNSSGAICSRLAKEANVVRSLVGDRLALVVQTISAVVIAFTMGLVIAWRLAIVMIAVQPIIICCFYTRRVLLKEMSSKSIKAQDESSKIAAEAVSNLRTITAFSSQDRILKMLEKAQQGPSHESIKQSWYAGIGLACSQSINFCAWALDFWYGGKLVSQGYITAKALFETFMILVSTGRVIADAGSMTTDLAKGSDAVGSVFAILDRYTKIEPDDLEGYKGEKLVGKIELHDVHFSYPARPNVMIFEGFSIKIDAGKSTALVGQSGSGKSTIIGLIERFYDPLKGIVTIDGRDIKSYHLRSLRKHIALVSQEPTLFSGTIRENIAYGACEKVDESEIIEAARDANAHDFISSLKDGYETWCGDRGVQLSGGQKQRIAIARAILKNPEVLLLDEATSALDSQSEKLVQDALERVMVGRTSVVVAHRLSTIQNCDLIAVLDKGTVVEKGTHSSLLAKGSSGAYYSLVSLQRRPTNIIVDSSNEIN 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00140 1270 MobiDBLite consensus disorder prediction 603 634 - -
Car02g00140 1270 CDD ABC_MTABC3_MDL1_MDL2 1015 1255 - -
Car02g00140 1270 Pfam ABC transporter transmembrane region 38 304 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car02g00140 1270 Pfam ABC transporter transmembrane region 694 962 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car02g00140 1270 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 22 1260 - -
Car02g00140 1270 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 22 1260 IPR039421 -
Car02g00140 1270 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 362 598 IPR003439 GO:0005524
Car02g00140 1270 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1015 1252 IPR003439 GO:0005524
Car02g00140 1270 ProSitePatterns ABC transporters family signature. 1155 1169 IPR017871 GO:0005524
Car02g00140 1270 SUPERFAMILY ABC transporter transmembrane region 676 999 IPR036640 GO:0005524|GO:0016021
Car02g00140 1270 CDD ABC_MTABC3_MDL1_MDL2 362 600 - -
Car02g00140 1270 Gene3D ABC transporter type 1, transmembrane domain 25 608 IPR036640 GO:0005524|GO:0016021
Car02g00140 1270 Gene3D ABC transporter type 1, transmembrane domain 654 1003 IPR036640 GO:0005524|GO:0016021
Car02g00140 1270 CDD ABC_6TM_Pgp_ABCB1_D1_like 37 335 - -
Car02g00140 1270 SUPERFAMILY ABC transporter transmembrane region 32 346 IPR036640 GO:0005524|GO:0016021
Car02g00140 1270 CDD ABC_6TM_Pgp_ABCB1_D2_like 682 998 - -
Car02g00140 1270 Gene3D - 1005 1261 IPR027417 -
Car02g00140 1270 MobiDBLite consensus disorder prediction 616 634 - -
Car02g00140 1270 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 699 980 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car02g00140 1270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 356 600 IPR027417 -
Car02g00140 1270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1011 1255 IPR027417 -
Car02g00140 1270 ProSitePatterns ABC transporters family signature. 501 515 IPR017871 GO:0005524
Car02g00140 1270 Gene3D - 352 601 IPR027417 -
Car02g00140 1270 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 38 327 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car02g00140 1270 Pfam ABC transporter 381 529 IPR003439 GO:0005524
Car02g00140 1270 Pfam ABC transporter 1035 1183 IPR003439 GO:0005524
Car02g00140 1270 SMART AAA_5 1042 1235 IPR003593 -
Car02g00140 1270 SMART AAA_5 389 575 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00140 Car-Chr2 1343017 1350534 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00140 2 1256 Calmodulin-binding Proteins AT2G36910 44.479 0.0 1058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00140 K05658 - gmx:100807709 1980.3