Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00114 ATGCATGGGTTCGGTGGTGAGAAGTGGAAACACAATCGGCACATGTGGCCTGTACCTTCTAACGCGACCACTGTAGTCCCTGTTTCTTCACCGTCTCAATTTATATGCAAAGATGGACGCAAGATTCGTGTTGGTGACTGTGCACTTTTCAAACCACCCCAGGACTCACCTCCTTTTATTGGAATAATTCGCAAGTTAACGTTCCATAAAGAAGAAAATCCAAGTTTACAAGTGAATTGGTTTTACCGACCTGCTGATTTGAAGCTCGCTAAAGGGATTGTAGTGGAAGCTGCACCAAACGAAGTCTTCTACTCCTTTCACAAGGATGAGATATATGCTGCATCATTACTCCATCCTTGTAAAGTCGCATTTCTCCGTAAAGGTGTTGAACTTCCTTCAGGGATATCCGCATTTGTTTGTAGACGAGTGTACGACATTGATAACAACTGTTTACGGTGGCTAACTGATAAAGATTATATTAATGAACAGCAGGAAGAAGTTGACCAGTTATTAGACAAGACAAAACTAGAAATGCACGGTGCTGTGCAATCAGGAGGCCGTTCCCCAAAACCCTTGAATGGTCCATCATCAACACAGTCATTGAAATCTGGTTCTGATAACATTCAAAATAGTTCTTCCTTTGGTGTACAGGGTAAAGGAAAAAAGAGAGAGAGAGGTGATCAGGGATCTGATTCATCTAAAAAAGAGCGATTATTTAAAGTAGAAGATGGAGATTCTAGTCAATTCAGACCAGAGGGCACACTAAGGTCTGAGATTGCTAAAATCACTGATAAAGGTGGGCTTGTGGACTTTGAAGGAGTTGAAAGATTTGTACAGCTCATGCAACCTGACAGTGCTGATAAAAAAATAGATCTGGCTGGGCGAATAATGCTTGTTGATGTAATAGCGCTCACAGATCGCTATGACTGTCTTGGCTGGTTCGTACAGCTCAGGGGTTTGCCTGTGCTAGATGAATGGCTGCAGGAGGTCCATAAGGGAAAAATTGGTGATGGTAATGTTGATAAGTCTGAAGAATTTTTGTTAGCTTTACTTCGTGCTCTGGATAAGCTTCCTGTGAACCTTCATGCACTACAAACCTGTAATGTTGGAAAATCTGTTAATAATTTACGTAGCCACAAAAATTCTGAAATTCAGAGGAAAGCCAGGAGTTTGGTAGACACATGGAAGAAACGTGTTGAAGCTGAAATGAACATGACTGACTCAAAATCTAGTTCAACCCGTGCTGTTTCTTGGCCTGCAAAGCCAGCACCACCTTCTGACATTTCACACTCCGCAAATAGGAAAACTGGAGGATCCTCTGAGAATGTTGCAAAGAGCTCTCCTATTCAACCTTCATCATCCAAAAATTCTCAAGCTAAACTTAATTCTGGAGAAGCACTATCCAAGTTCTCTTCATCCCCTGGATCAACTAAATCTATGACTGTTTCAGTAGGAAGCAATGCAAAAGATCAAAATACTAAACTCGTTGGAGCAACGACATCGGATCTACCTCTAACACCTATCAAGGAGGAGAGGAGCAGCAGTTCTAGTCAATCTCAAAACAACAGCATATCTTGTTCTAGTGACCATGCAAAGACTATTGGTTCTTGCCGGGAAGATGCAAAGAGCTCCACTGCAGCGTCAATGAGTGTGAGCAAAGTTGCTGGTGGTGCATCCCGAACTCGGAAGTCAAGTAACGGTGTACATGGAGCTGGCGTTGCTGTAGTTCAGAAGGATCATAGCTCTGCAAAGAATTCAACAAGAAATTCACCTTCTGATAAAGTTTCCCCAACTCGAATGTCCCATGAAAAACCATCTGATCAGCCCCTTGCCGATCACGGTCACAATCAGCGGCTGATTCTCCGGTTGCCAAACACTGGTCGCAGTCCTTCAAGGGGAGCTAGTGGGGGTTCTTTTGACGAACATGCCATCCCATGTGGCAAAACATCACCTCCTGCCGACAAGAATGAGAGTCAGGACAGGAGAGTTAAACCTAAAACTGATTGTATGCAGACCCATGCGTTGAATGTGTTAAACGATGTATCCAATGCTAATGAAATTACTGGTTCTGATGAAGCTAAGGGTTCTCCACCGGTGCATGAGCGGTGCAGGGTTAACGAAGATGGTGATAAAGCAACAGATACGCCAAAAACAACTAGTTCTTCATCTGGATTTGTTTCCAGATCAGGTCAGACTTATGATGCTTCTTTAAGCCCCATGAATGCATTAGTTGAGAGCTGTGTAAAATTTTCTGAAGCAAGTGCCTCTGTTTCCCCCGGAGATGATGGGATGAATCTTCTTGCTTCTGTGGCTGCGGGAGAAATGGCCAGATCTGAAAATGCCTCACCGGAGAGGAAGTCTCCTGCAGCTGATGAATCAAGCTCTGGGAATGATTCCAAGTTGAGACATTCTTTTGAAGCAGCTGTTCGCACTCTCAGACAATCTGATGGTGGGGCTTCTGGAGAGCATCCTCTGAATACTGTTGAGCCTTTGCAATTCAAAAATGATTCTAGGCATCCTGTGACAACAACATTGCGTGATTTTTCAGATGGTGAAGCCATTTCATCTAGCTGTGTGGAGAAAACTGGTGATGGTAGAACTCAAATAAATTTCTCTACTACAGATGCAATACAGAATGCTGAAGGTCCATGCTTACGGCCTGACACCAAAGAGGATACTTCTGAAACTATGTATCCAGCTGGAAAGGAGTCTCATGCAGAAGCTGGGGGAGCTGAGCGTTTTCAGGAGCAGAGGGAAATGGGTACTCAATGGGCTAAAAGCAGCAGTAGTTCAGACTCTAAATTGAAGTCAAGGACTTCCTCTTTCAATGATGATCAGAAGATTGATAACATGGATGACCGTATCGCAGAGCATGAGAAAATGTTGGTTCCAAAAGCTGTTGCAAGTGTTATGAATGAAAATGAACATGGTAAAAAATCGCCTGAGTTATCTCCAGGTGTAGATAATGAGAGCCAGATCAGTGCAGAGAAAGTCACAGGTATGGTTATACCAATGCAAAAAGGCTCTCCTGTTGCAGATAAATCTGAGTCCATTGATTTAATAAGGGAGAATGTCATGTCACCTGCTTCTGGTAATGTTTTGACGATCGCCAGGGATGAAATTGCTAATAACGGGAAGCCCTTTGAGAATAAACCTGATGAAAAACGAATGGATCTGGATTCATCAGTTGCAGATGGTGTTAATAACCGGTTTGAAGAGAATTTTGGTAGAGAAGAGGTTATTGGCCACTGCTCTAGTTCATCAGTAAAACCAGATGTACCAATTGTACCTGGAAAAGATAATGATGTTCCCAAAACAAGTGAGTCTAACCTAGAAGGAAAGAAATCTGTGGTTGCTGGAGAATTGAATGTGGGTGGTGCTAATCCGTCACCAACTGCCACTGGTTCTGATGCAGCTGTTAAACTGGACTTCGATTTAAATGAAGGATACCCTGTTGAAGATGTAATCCAAGGGGATATTGTTAGACAGGAAGAACCTACCAGTTCATCTGCAGTTCATGTTTCGTGTCCATTGCCATTTCCCATTCCGTCCCTCTCTGGGGCTTTCCATGCTTCAATTACAGTGGCTTCTGCTGCCAAAGGACCGGTTGTTCCACCAGAAAATCCATTACGGAGTAAAGGGGAACTTGGATGGAAAGGGTCAGCTGCTACAAGTGCATTCCGGCCAGCTGAACCTAGGAAAAATGCTGAGATGCCATCAAATACTAATGATATGCCTTGTGTTGACGCCACATCTGTCAAACAAGGGCGCCCTCCTTTAGATTTTGATTTAAATGTTGCAGATGAAAGGAGTTTTGATGACGTTGCTTACCGAGGTTCCTTAGAATCCGGACCACATGACCGCAGCACTGTGGGACTGGATCTTGATTTAAACAGAATGGATGAGACTGCCGAAGCTGGAAATTTCTCTATGGGTAAACTGGATATTCCTTGTTTACCAAGTAAACCTTCATTGTCCAGTGGGTTATCTAATGGCGGAAGTGTCTCACGAGACTTTGATTTAAATAATGGGCCAGGTCTTGATGAAGTTAGCACTGAAGTCCCAGTTCGTAGTCTGCAGATGAAAAGTAGCGTGCCATTTTCAAGTGCTGTTCATGGCACCAGAACAAATAATGCTGAATTTGGGAATTATTCTTGGTTTCCTCCGGGCAATTCTTATTCTGCAATTACTGTCCCACCACTTCTGCCTGGTAGAGGAGAGCAGAGTTATGTCGGTAGTTCTGGGGCACAGCGGATCATAGGTTCTACAGGTAGCACACCCTTTAGTCCTGAAATGTACAGGGGGCCAGTACTTTCATCCTCTCCAGCTGTTGCATATCCACCTACTGCCCCCTTTCCATACCCAGGATTTCCCTTTGAAACCAATTTTCCATTATCTTCAAGCGCCTTTTCTGGTTGTTCAACAGCGTTTATGGATTCATCAACTGTGGGCGGACTTTGCTTTCCTACCATGCCCTCACAGCCAGTTGGACCTGGTGGTGTTGTCTCATCTCCATATCCCCGTCCCTATGTTATGAGTCTTCCAGGTGGTACAAGTAATGTAATTCCGGATAACAGAAAATGGGGAAGTCAGAGTCTGGATCTTAATTCAGGCCCTGGTGGCACAGATGCCGAGCGCAGAGATGACAGATTGCCTTCGGGATTGAGGCAGCTGCCTGTCTCCAATCCACAAGCCTTGATGGAGGATCACTTGAAAATGTTTCAGATGGCTGGTGCATTAAAAAGAAAGGAACCTGATGGTAGTTGGGATGGAGCTGATAGATTCAGTTACAAACATCCCTCATGGCAGTAG 4812 0.4397 MHGFGGEKWKHNRHMWPVPSNATTVVPVSSPSQFICKDGRKIRVGDCALFKPPQDSPPFIGIIRKLTFHKEENPSLQVNWFYRPADLKLAKGIVVEAAPNEVFYSFHKDEIYAASLLHPCKVAFLRKGVELPSGISAFVCRRVYDIDNNCLRWLTDKDYINEQQEEVDQLLDKTKLEMHGAVQSGGRSPKPLNGPSSTQSLKSGSDNIQNSSSFGVQGKGKKRERGDQGSDSSKKERLFKVEDGDSSQFRPEGTLRSEIAKITDKGGLVDFEGVERFVQLMQPDSADKKIDLAGRIMLVDVIALTDRYDCLGWFVQLRGLPVLDEWLQEVHKGKIGDGNVDKSEEFLLALLRALDKLPVNLHALQTCNVGKSVNNLRSHKNSEIQRKARSLVDTWKKRVEAEMNMTDSKSSSTRAVSWPAKPAPPSDISHSANRKTGGSSENVAKSSPIQPSSSKNSQAKLNSGEALSKFSSSPGSTKSMTVSVGSNAKDQNTKLVGATTSDLPLTPIKEERSSSSSQSQNNSISCSSDHAKTIGSCREDAKSSTAASMSVSKVAGGASRTRKSSNGVHGAGVAVVQKDHSSAKNSTRNSPSDKVSPTRMSHEKPSDQPLADHGHNQRLILRLPNTGRSPSRGASGGSFDEHAIPCGKTSPPADKNESQDRRVKPKTDCMQTHALNVLNDVSNANEITGSDEAKGSPPVHERCRVNEDGDKATDTPKTTSSSSGFVSRSGQTYDASLSPMNALVESCVKFSEASASVSPGDDGMNLLASVAAGEMARSENASPERKSPAADESSSGNDSKLRHSFEAAVRTLRQSDGGASGEHPLNTVEPLQFKNDSRHPVTTTLRDFSDGEAISSSCVEKTGDGRTQINFSTTDAIQNAEGPCLRPDTKEDTSETMYPAGKESHAEAGGAERFQEQREMGTQWAKSSSSSDSKLKSRTSSFNDDQKIDNMDDRIAEHEKMLVPKAVASVMNENEHGKKSPELSPGVDNESQISAEKVTGMVIPMQKGSPVADKSESIDLIRENVMSPASGNVLTIARDEIANNGKPFENKPDEKRMDLDSSVADGVNNRFEENFGREEVIGHCSSSSVKPDVPIVPGKDNDVPKTSESNLEGKKSVVAGELNVGGANPSPTATGSDAAVKLDFDLNEGYPVEDVIQGDIVRQEEPTSSSAVHVSCPLPFPIPSLSGAFHASITVASAAKGPVVPPENPLRSKGELGWKGSAATSAFRPAEPRKNAEMPSNTNDMPCVDATSVKQGRPPLDFDLNVADERSFDDVAYRGSLESGPHDRSTVGLDLDLNRMDETAEAGNFSMGKLDIPCLPSKPSLSSGLSNGGSVSRDFDLNNGPGLDEVSTEVPVRSLQMKSSVPFSSAVHGTRTNNAEFGNYSWFPPGNSYSAITVPPLLPGRGEQSYVGSSGAQRIIGSTGSTPFSPEMYRGPVLSSSPAVAYPPTAPFPYPGFPFETNFPLSSSAFSGCSTAFMDSSTVGGLCFPTMPSQPVGPGGVVSSPYPRPYVMSLPGGTSNVIPDNRKWGSQSLDLNSGPGGTDAERRDDRLPSGLRQLPVSNPQALMEDHLKMFQMAGALKRKEPDGSWDGADRFSYKHPSWQ 1603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00114 1603 MobiDBLite consensus disorder prediction 1199 1245 - -
Car02g00114 1603 MobiDBLite consensus disorder prediction 189 217 - -
Car02g00114 1603 Gene3D - 29 258 IPR043151 -
Car02g00114 1603 ProSiteProfiles TFIIS N-terminal domain profile. 321 402 IPR017923 -
Car02g00114 1603 Pfam TFIIS helical bundle-like domain 350 399 IPR017923 -
Car02g00114 1603 MobiDBLite consensus disorder prediction 682 733 - -
Car02g00114 1603 MobiDBLite consensus disorder prediction 429 566 - -
Car02g00114 1603 MobiDBLite consensus disorder prediction 1582 1603 - -
Car02g00114 1603 MobiDBLite consensus disorder prediction 1084 1112 - -
Car02g00114 1603 ProSiteProfiles BAH domain profile. 40 155 IPR001025 GO:0003682
Car02g00114 1603 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 274 403 IPR035441 -
Car02g00114 1603 SMART BAH_4 40 155 IPR001025 GO:0003682
Car02g00114 1603 CDD TFIIS_I 331 400 - -
Car02g00114 1603 MobiDBLite consensus disorder prediction 774 801 - -
Car02g00114 1603 SMART TFS2_5 327 401 IPR003617 GO:0005634
Car02g00114 1603 MobiDBLite consensus disorder prediction 218 249 - -
Car02g00114 1603 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 309 413 IPR035441 -
Car02g00114 1603 MobiDBLite consensus disorder prediction 879 949 - -
Car02g00114 1603 MobiDBLite consensus disorder prediction 1524 1558 - -
Car02g00114 1603 MobiDBLite consensus disorder prediction 920 937 - -
Car02g00114 1603 MobiDBLite consensus disorder prediction 715 733 - -
Car02g00114 1603 MobiDBLite consensus disorder prediction 1524 1538 - -
Car02g00114 1603 MobiDBLite consensus disorder prediction 597 611 - -
Car02g00114 1603 MobiDBLite consensus disorder prediction 179 252 - -
Car02g00114 1603 Pfam BAH domain 41 146 IPR001025 GO:0003682
Car02g00114 1603 PANTHER BAH DOMAIN-CONTAINING PROTEIN 1 1603 - -
Car02g00114 1603 MobiDBLite consensus disorder prediction 579 596 - -
Car02g00114 1603 MobiDBLite consensus disorder prediction 402 666 - -
Car02g00114 1603 MobiDBLite consensus disorder prediction 695 714 - -
Car02g00114 1603 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00114 Car-Chr2 1112245 1120595 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Car02g00114 BAH 1.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00114 - - gmx:112998769 2303.09