Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00103 ATGTTTATACCTAATTGCAAATGTTGTGTGTTCTTAGATGCATACATCATGTTTTTTAGATGCTTTAGATCAGTTCCACTAAACAATGAAGTGACATTTGGAGACATGTTAAAGAAAACTGCTTGTCTAAAAATTCCTATCAAGGAAGTGTATGCTGCCACCAACCATCTTAATGAAATGAATGTCATTGGGGAAGGAACTTCAGGTAAGGTCTATAAAGGCACAATGAAAAATAATGAGCAAGTTGCAGTGAAGCATATAATCAATGATGATGGAAATATAGAAACTTTTGTTAGAGAAGTTACAAGCCTATCTCATGTCAAGCATCAAAATCTTGTTTCTTTGCTTGGTTGTTGTGTTGAGGGAGATGAATGTTTTATAATCTATGAAATATGTCCTAATGGGAGTCTTTCAGAATGGTTATTTGGGAAGAAGAACAAGGTGCTTTCATGGATAAAGAGACTAGAAATTGCAATTGATAGTGCTAGAGGTCTTTGGTTTTTGCATACATATCAAGGAGGATGCATTGTTCACCGTGACATCAAGCCAACAAATATCCTTATTGGGTCAAATTTTGAGGCAAAACTATCAGATTTTGGATTGTCTAAAGTAATAGAGGTAGGTGAAACATATGCTATTTCAGAAGTTAGAGGAAGTTTTGGATATGTGGATCCTCAGTATCAAAGCAACAACCATGTGAATTCATCTGGTGATGTTTATAGCTTTGGCATGGTACTTCTACAAATCATCTCTGGAAAAAGGGTCATAAATTTGAAACTGAAGAAACCAATGTCACTTAATAAAATGGCAAAATCCCTCTCTAGGAATGGTAGCATTGCAGAATTTGCTGACCCTAGACTTGAAGGAGAGTATTCTGAGGAAGCATTTGATTTAACACTTCACTTGGCTTTATCATGCACAGCCCTTAACCAACAAAGACCATCTATGGAACAAGTTGTTAAAAGACTAGAAGAGGCCTTATTCATTTCTAGGGAGAGGAATATTTTTACTAAATAA 1017 0.354 MFIPNCKCCVFLDAYIMFFRCFRSVPLNNEVTFGDMLKKTACLKIPIKEVYAATNHLNEMNVIGEGTSGKVYKGTMKNNEQVAVKHIINDDGNIETFVREVTSLSHVKHQNLVSLLGCCVEGDECFIIYEICPNGSLSEWLFGKKNKVLSWIKRLEIAIDSARGLWFLHTYQGGCIVHRDIKPTNILIGSNFEAKLSDFGLSKVIEVGETYAISEVRGSFGYVDPQYQSNNHVNSSGDVYSFGMVLLQIISGKRVINLKLKKPMSLNKMAKSLSRNGSIAEFADPRLEGEYSEEAFDLTLHLALSCTALNQQRPSMEQVVKRLEEALFISRERNIFTK 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00103 338 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Car02g00103 338 ProSitePatterns Protein kinases ATP-binding region signature. 63 85 IPR017441 GO:0005524
Car02g00103 338 Coils Coil 306 326 - -
Car02g00103 338 Gene3D Phosphorylase Kinase; domain 1 25 130 - -
Car02g00103 338 Pfam Protein kinase domain 59 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00103 338 SUPERFAMILY Protein kinase-like (PK-like) 45 324 IPR011009 -
Car02g00103 338 PIRSF ILK 27 334 - -
Car02g00103 338 SMART serkin_6 57 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00103 338 Gene3D Transferase(Phosphotransferase) domain 1 132 334 - -
Car02g00103 338 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 31 331 - -
Car02g00103 338 PANTHER OS01G0253100 PROTEIN 31 331 IPR045271 GO:0004714|GO:0006468
Car02g00103 338 ProSiteProfiles Protein kinase domain profile. 57 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00103 Car-Chr2 981162 983920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00103 49 333 Receptor kinase-like Gene Family AT2G28970 42.907 2.80e-60 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Car02g00103 Pkinase 3.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00103 - - cam:101490112 607.06