Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00100 ATGATCATGGAACTCACCGATTCCACCGCTGGTAACATCcctccgccgccgccgccgccaccaccaccacaccacaaccaccaAGACACTCGCTCTATTCTCTGCATCGACCTCAACGAGATCCCTTCACCTTCTTCTTCATTCCCCGAAACCCTACCTGACTTCACAATCGACATCGTCCGTACTTACCACGAGAATCCCGCTCCTCCTCCCGGTGGTCCTGCACCTCTTCCCGGTGGTCCAACTCCCTGCGCCGCTTGTTCCAAGTCTGGCGGCGGTGGAGGTAGCGTTTTAGTTTGTGACGGTTGTGAGAGAAGCTTTCACTTGGCTTGCGCCGGGATTCGCGGCGGAGGTGGTCGTCAGAGTGCGGCGAGTTTAAGAGAGTGGGTGTGTAGTGAGTGTTTGGCTGGAGGTGTGAAGAGTAAACGCTGGCCGTTGGGTGTGAAGTCTAAGCAGCTTCTTGATATCAACTCTTCGCCGCCCAGTGATGCTGATGGTGAGGAGTTGCATGATGCGAGAAAGCACACTCTGGGTGATAAATCTTTTGGTGCTCCAGTGGCATATTCAAACTTCTACAACGGCGGTGTGTTTGGTTTCCAAAGGGCATCTGGAGTTGTGACACAAGCTGTTAGAGTGGGTTTTGAGGATATATTGAATCACACCAAATCAATGAGTAGACGCTTTGAGGAAGCATATATGGATTTGCCTCCTGGAATTCATAGTAGTAGTAATAATACAGCTATTAATGTACCATCTCAGAGTCCAAATGAAACGAAGGTTTTGCAGGCTCTTAGAGATTTTATATCTGAAAAGCATGGTGTACTGGAGGAAGGTTGGCGAGTGGAATTTAGAAAATCAATGATCACCTCTGACCCATATGCAGTTTATTGTGCACCCGATGGAAAGATATTTGATTCTGTGTATGAAGTAGCTAATTTTCTGGGGCTACCGTCTGGCTTCAATTCTATGGAATCCGAAGTAAGAAATGAAATGTCTTTTTCTTTGGGTGGGCCTCACCTATCCAGAAAAAGAAAATCTTCTAAAACTCTGGCAGCCAATGGTTTTGTGGAAAAGCAGGGAACCTTGATCAATAGTAATTATAAGGATTATTCTTCTGATGGTTTAAATATGGAATGTGCCAATGCTCAGGGTACTGTCCCAAAAGCCACTGAGATTAGAAGAAAAGAGAATGGTCACTCCGACCTTCATCAATCCACTGATGAACTTCCTCTGCAGTTTAAGGACTTCTATGTTCTTTCTTTGGGAAAAGTTGATGGAAGACCATCATATTATGATGTTAATGTTATCTTTCCTGTTGGTTATAAATCTTGTTGGCATGACAAGATTACCGGCTCTCTATTTACGTGTGAAGTTTTGGATGGCGGCGATCCTGGTCCTATATTCAGGATTAAAAGGTGTTCATGTTCAGAATTTCCTATTCCAGTTGGGTCAACCATCCTTTCAATGCAAAGTCATTGTCATTTTGTGAGCGAAACCAATGAAGGTCAGAGAGAGACTAATGACAGTATGGATTTAGATGGTGATGAGAGTATCCAGATGATCCTTTTAGAGTCTCGCGCACCAACGGAAAATGACATCTTAAGTTGTTTTGCCAGTTGCTCTAATGAATCATGTGCATCAGAAGGATTAAGGCCAGTTGCTGGTTTAGTTCATGATAATACTGGAAATTCATTTGCTAATAACATGGAAATTATTTCTCAAAAGTTACTCAATGCTTGCAAGGATATCTGCGAGAAGAAAGGAACTCTTAAATTATATTGTAAACATGTTGAAAGTGAAACAGGCTTACATAAATGGGATTTAAGGAATGAAACTAGTGATACCCACTTCACTTTGTTGGATAAATTTTGTGGTTCACCTGGTTCTGTCAGCATTCCAGATGCAATTTATGCAGACAATGATCTGAAAGGTCTATATGAGCGATTAGAGAAATGGTTGGAGCAGGATAGATTTGGATTTGATGTTGAATTTGTGCAAGAAATATTGGAACAGCTTCCTGGTGTCCAAGATTCTTTGCAATATGAACTTCTGAGCAGTAGAAATAATAGCTCTTCATTACCAACAGTGGAAAATGGTTTCCTAAAGGTTGAATGTAAAGGTCAATCAAAATATCAGGATGAAGAAGAAGCAGTTCAAGGTTTATATAGAAGGCCTAAGAAGGCAAGATTGACTGAAAGATACGTTAAGGAACACCGATGTCCACCTCCTGGGAAATCACTGTGCTCCAGGGCTCCTACTGAACTCATTGGTGACATTTTTCAGGTTTGGGAGCTTTTACAACGGTTTCATGAAATTTTAGACCTGAGAGAACCATTGTTATTAGAGGAGCTTGAGAAGGAACTTATCAACCCATGGTTTGATGAATTGGATTTCCCTGAGAAATCTGAGAGAGGAATGGGAGGAAGTCAACTTTTAAGTTCAAAAGGGGGTGTTGGCGATTGCCGTCTAATATGTGAAGCTGGTCCATCAAGTTCCGCAGAAAGTTCTTTTATTCAAGTGGAAACAGAAGCAATGAAGGAGGAAGCCCAAGTTAAGCTCGCATCTTTCACCTATGTCAGATGCTTTGGTGTAGCTTTGACCAAGGCCCATAATTCATTACTAAGAGTGCTAATAGGTGAACTGCAATCAAAGGTAGCTGCTCTGGTGGATCCAAATTCTGAAGAGACTCGGACAAGACGGGGAAGAAGGAAAGATATAGATAGTGCAGTTCCTGCTAAACGAACCAAGGTCAATATGCTGCCTATCAATGAATTGACTTGGCCAGAACTAGCTCGTAGATATATCTTGGCTTTCTTATCAATGGATGGTAACCTTGAGTCTGCAGAAATTACTGCCCGTGAAAGTGGTAAAGTATTTCGTTGCTTACGAGGTGATGGTGGTTTGCTGTGTGGTTCCCTTACTGGTGTGGCTGGGATGCAAGCTGATGCGCTGTTGCTTGCGGAGGCTTCGAAGAAGATTTTTGGTTCATTGAGCAGAGAAAATGATGCACTCATCATAGAAGAAGAGGAGTCTGATGCAAAGGGAACTTCTGAAATTAAATTGACGAATGATGGTAATATTCCTGAATGGGCACAGGTCCTGGAACCTGTCAGAAAATTACCAACGAATGTGGGAACCAGAATCAGAAAGTGTGTTAATGATGCTCTAGTTAAGAATCCGCCAGATTGGGCGAGGAAAAGACTGGAGCACTCAATTAGTAAACAAGTGTACAAGGGCAATGCCTCTGGACCAACAAAGAAAGCAGTTCTTTCAGTGTTGAAGGATGTAGTTGAAGGAATGCACCAGAATCCCAACAAGGGAAGGAAAAAGAAGATTGTTATATCTATTTCTGACATTATCATGAAAAAATGCCGCACTGTATTACGTCGTGCAGCTGCTGCAGATGATTCAAAAGTTTTTTGCAATTTGCTGGGAAGAAAATTAATAAATTCTTCTGATAATGATGATGAGGGGCTTCTTGGATCTCCAGCTATGGTGGCCCGCCCTCTTGACTTCCGGACGATTGACCTAAGATTGGCTTCTGGAGCTTATGATGGATCTCACGAAGCTTTTCTTGAGGATGTGCGTGAGCTGTGGAGCACTGTTCGTGTTGCTTTTGGTGATTATCCTGATTTAGTTGAACTGGCGGAAAAATTATCCCAGAATTTTGAATTTTTGTATAAAGAGGAGGTTGTCGCCTATATCCAAAAGTTTACGGAGTATGCTAAAGTGGAATGCTTAAGTGAAGAAATGAGAAAAGAAGTTGATGATTTTATTGCATCAACAATTGAGATTCCGAAGGCCCCTTGGGATGAGGGAGTCTGTAAAGTATGTGGCATTGATAGGGATGATGACAGTGTTCTACTATGTGATAAATGTGATGAACTTGCACAGATTGCTGGAAAACGTAGAAGTAAAAAGTTCCAGGGAGAAGTTAATTGTCTTTACTTGGAAGCACTAACTCATTTATCGGCTGTAATTGAAGAAAAGGAATATTGGGAGTACAATGTGGGAGAGAGAACACTCCTTCTCAAGTTTTTATGCGATGAGTTGCTCAACTCTTCCCTGATACGACAGCATCTTGAGCAATGTTCAGAGTTGTCTGTTGAGTTACATCAGAAATTGCGTGCACTTTCTGTAGAGTGGAAAAACCTGAAAATTAAGGAAGATGTTTTATCCACAAAAGCTGCAAAATTTGATGCATTGTCGCAAAGTGCCACCGGGGAAATTGGTCTTAAGGAAGGGTTCCCATCGTTGTTCTCAAATACTAGTAAATGTTTGGTTAAGCCACATACTGCAACCACCAATGCTAGTGGTGTTGGGGCGCTTGTTGATAGTCTAACTTCAGAAGAGATTCCCAAAGAGAAGTGTAGGTTCAATAGTGTTGATAAAAGCATATCTGTGACACATTCTGATTCTGATAGCCAAAATTTGAATTCCATAGAAGGACAACATAGGAGTGTTCCTGTGGCAGTGGAGTCTCAATGTACCGATAAATCTCCTAAGTCTTTTCCATCCCCAAATCACATGCCTCAAGAAATAAATGGTTACAGCGGAGCAACTCATATACAGGGTAGCCACCAGCAATGGGAGGTAAGGGATGCATCTACTTCTGCAACATACCAGCAAGGAAAATGTGTGCCTGTTGAAGTTTCCCAAATTGCTGTGAACGAGTCGGAACCATACCACCTTGAGCTCAATTCCATCAAGCGTAATATTTCACTACTGCAGGACTCTATGACTAGCATAGGAGCACAGCTGCTGAAGCTCTCTGTTCGTCGAGAATTTTTGGGTATTGATTCCACTGGTCGACTGTACTGGGCTTTGGCTACACCCAGGGGACATTCACGTATAATTGTCGATGCAAGTGCTGTTCTGCAGCATGGAAGAGGATTGTCAGTTGGCAAAGATTCTTCAGAGAAGTTTTCTGCCCTCCAGCATTGTGCATTATCTGAGAAGAATAACTATAAGATGTTGGGGTTGATCAAGGACTGCTCTCCTTTGATGTCCCAACCATTTAATGCTTTAGGCAATAGTTCACCGTGGATTGCTTATGAAACTGATTCAGAAATTGAAGAGCTATTGGGTTGGTTAAAAGATAATGACCCTAAAGAAAAAGAACTGAGAGATTCCATTATGCTGAGGTCAAAATATAGACTTCAAGAGTCTATTAATGCACACACTGAAGGTCAGGTTGAGGACCAAGGATCTGTTTATTTGCCAAGAAATGCAGTATCTAATTCTCTTGTCACAAAGGCCACTTCCTTGCTGGAAATGAAATTTGGTCCCTTCTTTGAGTTGGATACTGCTGAGGTGTTGAAGAAGCAAAGTAAAAAGGCTAGAACAACTAATGATGAAAAGTTGTATAGGTGTGAGTGCCTAGAGCCCATATGGCCTTCTAGTAAACATTGCTTGTATTGCCACAAAACCTTTTTGAGTGATGTTGAGTTTGAGGGACACAATGATGGCAAATGTAATGCAGGACTTCTTGCCTTGGAGAAGAATAAAGATAAAAGTGGATCTTCTAACGGAAGAGGGAACTCGAAATGTGATACCTCACATGAAAAATCCAGAGCTGATGCTGTTACAGCTGGAACCTCAATCAATAGATGTTCCAAGCTAAGTTCAAGTTTGATTAAATTTTCAAATGAAGATTCCTCTTGCCCATTTAACTTCGAGGATATATGCTCGAAGTTTGTGACAAATGATTCCAACAAGGAACTTGTCAGAGAAATTGGTCTTATTGGTTCAGATGGTGTCCCATCCTTTGTTCCTTTCATATCTCCTTTTGTTAGTGATTATACACCATTCTTAACCCTAAAGGATGATGGCATTGTTGATGGTGTGTCTAAAGCTTCAGAAAGCCTGGTTTCTTCAGAAACCACTGATGGAGCTGGCGTATGCCATGACTATAAATCAGGAAAATCTACTGAAAGTTTATCTGCAAATGAAAACAACCAAGCAGGAAAATCCAACAAATCATCTTTAGGGGAACAAAGAGATGGAAAGGGAGTTGATGGCTGCTGTGTGGTTCCTTTGTCGTCCTTGAGACCACTAGTTGGAAAAGTTTCTCATATTTTGAGGCAACTAAAGATTAATCTACTTGATATGGAAGCTGCACTTCCAAAAGTTGCTCTAAGACCATCAAAGGCACAGTTGGACAGAAGACAGGCCTGGCGTGCATTTGTTAAATCTGCCGAGACTATATATCAGATGGTTCAGGCAATAATTACACTGGAGGATATGATTAAGACGGAGTTCTTAAGGAATGACTGGTGGTACTGGTCATCATACTCAGCTGCTGCCAAATCTTCTACTTTGCCTTCGCTTGCTCTTCGCATATACTCCCTTGATTCAGCCATCATGTATGAGAAAATGCCCAATTCAAGTTTTGCTGACAGCTCTGACCCTCCTGCCATTGCGGAACTGAAACCGGTGATCCCTGCGGATGCAGATAAATCCAAAGCAAGCCGGAAGTCAAACAGAAAAAGGAAGGAACAAGATGGATGCATGAGTTTGGATGAAAAGGGCATGGGGCCAACTTCAGGTTTAAGCCACAGCTGCCGGTGTCACTTGTGGACTTCTTGTACATATAGCTGTCCAATTGGTTGCTCCATAGCGAGAAGTGGTATTATATTTTTCATTTTTCTAGCAGAGTCTGATCCATATATGAATACTTATCTACCTCCCCCACCCAACTGGTTTGAGAATCCAAATGAGGATATATCTTATGGGTCGGGTTGCAATTGCATTGATCTCGCCAACTGTGATGAGTTCTGTGTTGTTCCCATTGATATTTCTGATTTGTAG 6810 0.4156 MIMELTDSTAGNIPPPPPPPPPPHHNHQDTRSILCIDLNEIPSPSSSFPETLPDFTIDIVRTYHENPAPPPGGPAPLPGGPTPCAACSKSGGGGGSVLVCDGCERSFHLACAGIRGGGGRQSAASLREWVCSECLAGGVKSKRWPLGVKSKQLLDINSSPPSDADGEELHDARKHTLGDKSFGAPVAYSNFYNGGVFGFQRASGVVTQAVRVGFEDILNHTKSMSRRFEEAYMDLPPGIHSSSNNTAINVPSQSPNETKVLQALRDFISEKHGVLEEGWRVEFRKSMITSDPYAVYCAPDGKIFDSVYEVANFLGLPSGFNSMESEVRNEMSFSLGGPHLSRKRKSSKTLAANGFVEKQGTLINSNYKDYSSDGLNMECANAQGTVPKATEIRRKENGHSDLHQSTDELPLQFKDFYVLSLGKVDGRPSYYDVNVIFPVGYKSCWHDKITGSLFTCEVLDGGDPGPIFRIKRCSCSEFPIPVGSTILSMQSHCHFVSETNEGQRETNDSMDLDGDESIQMILLESRAPTENDILSCFASCSNESCASEGLRPVAGLVHDNTGNSFANNMEIISQKLLNACKDICEKKGTLKLYCKHVESETGLHKWDLRNETSDTHFTLLDKFCGSPGSVSIPDAIYADNDLKGLYERLEKWLEQDRFGFDVEFVQEILEQLPGVQDSLQYELLSSRNNSSSLPTVENGFLKVECKGQSKYQDEEEAVQGLYRRPKKARLTERYVKEHRCPPPGKSLCSRAPTELIGDIFQVWELLQRFHEILDLREPLLLEELEKELINPWFDELDFPEKSERGMGGSQLLSSKGGVGDCRLICEAGPSSSAESSFIQVETEAMKEEAQVKLASFTYVRCFGVALTKAHNSLLRVLIGELQSKVAALVDPNSEETRTRRGRRKDIDSAVPAKRTKVNMLPINELTWPELARRYILAFLSMDGNLESAEITARESGKVFRCLRGDGGLLCGSLTGVAGMQADALLLAEASKKIFGSLSRENDALIIEEEESDAKGTSEIKLTNDGNIPEWAQVLEPVRKLPTNVGTRIRKCVNDALVKNPPDWARKRLEHSISKQVYKGNASGPTKKAVLSVLKDVVEGMHQNPNKGRKKKIVISISDIIMKKCRTVLRRAAAADDSKVFCNLLGRKLINSSDNDDEGLLGSPAMVARPLDFRTIDLRLASGAYDGSHEAFLEDVRELWSTVRVAFGDYPDLVELAEKLSQNFEFLYKEEVVAYIQKFTEYAKVECLSEEMRKEVDDFIASTIEIPKAPWDEGVCKVCGIDRDDDSVLLCDKCDELAQIAGKRRSKKFQGEVNCLYLEALTHLSAVIEEKEYWEYNVGERTLLLKFLCDELLNSSLIRQHLEQCSELSVELHQKLRALSVEWKNLKIKEDVLSTKAAKFDALSQSATGEIGLKEGFPSLFSNTSKCLVKPHTATTNASGVGALVDSLTSEEIPKEKCRFNSVDKSISVTHSDSDSQNLNSIEGQHRSVPVAVESQCTDKSPKSFPSPNHMPQEINGYSGATHIQGSHQQWEVRDASTSATYQQGKCVPVEVSQIAVNESEPYHLELNSIKRNISLLQDSMTSIGAQLLKLSVRREFLGIDSTGRLYWALATPRGHSRIIVDASAVLQHGRGLSVGKDSSEKFSALQHCALSEKNNYKMLGLIKDCSPLMSQPFNALGNSSPWIAYETDSEIEELLGWLKDNDPKEKELRDSIMLRSKYRLQESINAHTEGQVEDQGSVYLPRNAVSNSLVTKATSLLEMKFGPFFELDTAEVLKKQSKKARTTNDEKLYRCECLEPIWPSSKHCLYCHKTFLSDVEFEGHNDGKCNAGLLALEKNKDKSGSSNGRGNSKCDTSHEKSRADAVTAGTSINRCSKLSSSLIKFSNEDSSCPFNFEDICSKFVTNDSNKELVREIGLIGSDGVPSFVPFISPFVSDYTPFLTLKDDGIVDGVSKASESLVSSETTDGAGVCHDYKSGKSTESLSANENNQAGKSNKSSLGEQRDGKGVDGCCVVPLSSLRPLVGKVSHILRQLKINLLDMEAALPKVALRPSKAQLDRRQAWRAFVKSAETIYQMVQAIITLEDMIKTEFLRNDWWYWSSYSAAAKSSTLPSLALRIYSLDSAIMYEKMPNSSFADSSDPPAIAELKPVIPADADKSKASRKSNRKRKEQDGCMSLDEKGMGPTSGLSHSCRCHLWTSCTYSCPIGCSIARSGIIFFIFLAESDPYMNTYLPPPPNWFENPNEDISYGSGCNCIDLANCDEFCVVPIDISDL 2269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00100 2269 Pfam PHD-finger 84 135 IPR019787 -
Car02g00100 2269 Gene3D - 1117 1237 IPR036427 GO:0005515
Car02g00100 2269 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 1297 2169 - -
Car02g00100 2269 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 30 1294 - -
Car02g00100 2269 MobiDBLite consensus disorder prediction 2151 2172 - -
Car02g00100 2269 CDD PHD_SF 84 134 - -
Car02g00100 2269 ProSitePatterns Zinc finger PHD-type signature. 84 134 IPR019786 -
Car02g00100 2269 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1318 1362 IPR028942 -
Car02g00100 2269 SUPERFAMILY FYVE/PHD zinc finger 82 145 IPR011011 -
Car02g00100 2269 MobiDBLite consensus disorder prediction 1836 1856 - -
Car02g00100 2269 Gene3D - 409 518 - -
Car02g00100 2269 PANTHER OS02G0192300 PROTEIN 30 1294 - -
Car02g00100 2269 MobiDBLite consensus disorder prediction 1975 1995 - -
Car02g00100 2269 PANTHER OS02G0192300 PROTEIN 1297 2169 - -
Car02g00100 2269 ProSiteProfiles FYR domain FYRN motif profile. 408 461 IPR003888 GO:0005634
Car02g00100 2269 Pfam Methyl-CpG binding domain 266 317 IPR001739 GO:0003677
Car02g00100 2269 SUPERFAMILY Bromodomain 1109 1229 IPR036427 GO:0005515
Car02g00100 2269 MobiDBLite consensus disorder prediction 11 26 - -
Car02g00100 2269 MobiDBLite consensus disorder prediction 1975 2003 - -
Car02g00100 2269 SMART PHD_3 83 135 IPR001965 -
Car02g00100 2269 ProSiteProfiles Zinc finger PHD-type profile. 81 137 IPR019787 -
Car02g00100 2269 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 143 IPR013083 -
Car02g00100 2269 MobiDBLite consensus disorder prediction 1 29 - -
Car02g00100 2269 CDD Bromodomain 1120 1227 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00100 28 2169 C2H2 Transcription Factor Family AT3G01460 42.889 0.0 1564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Car02g00100 MBD 7.3e-07 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00100 K22768 - gmx:100820223 2916.72