Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00074 ATGCCTGAAGGAGGAGGAAAAAAGAGGATACATTTTAGCAAACTATATTCATTTTCATGTTTCAAATCACCATTTAAAGATGGTCATTCACAAATTGGACAAAAAGGGTATTCAAGAGTTGTTTATTGTAATGATCCTGATAACATTGAAGCAATTCAGTTGAATTATGGTGGAAACTATGTTTCAACTACAAAGTATACAGTTTTTAATTTTATACCAAAGTCTTTGTTTGAACAGTTCAGAAGGGTTGCAAATATCTACTTCCTTATTGTTGCTTGTGTTTCATTTAGTCCCTTGGCACCTTATAACCCTTTAAGTATTTTTGCACCTTTGGTTGTTGTAATTGGTGCTACTACGGTTAAGGAAGCTGTGGAAGATTGGAGAAGGAGAAAACAGGATATTGAGGCAAACAACAGAAAGGTTCAAGTATATGGTAGAAACCATACATTTGTGGAGACTAGGTGGAAGAAACTTCGTGTCGGGGACGTGATTAAAGTGTACAAGGACGAATACTTTCCTTCCGATCTTCTTCTGCTTTCGTCAAGCTACGAAGACGGGGTTTGTTATGTCGAGACAATGAATCTTGATGGAGAAACTAATCTAAAACTAAAGCAAGCATTAGAGAAGACAACTCATCTTAACAATGAAAACTCTCTCCAAAATTTTAGAGCTATGGTCGAATGTGAGGATCCTAATGAAAATCTATACTCATTTATCGGAACATTAAAATATGACCGTGAAGAATATCCTCATCCTCTTTCCTTGCAGCAGATCCTTTTAAGAGATTCTAAGCTGAGAAATACCGAATATATCTATGGTGTTGTTATCTTTACTGGTCACGATACAAAAGTGATGCAGAATTCGATTGATCCTCCATCAAAGAGGAGCAAAATTGAGAGAAAAATGGATAAGATAGTATACATTCTTTTCAGTACATTGATTTTGATATCCTTTATCGGTTCTTTATTTTTCGGTGTTGAGACGAAAAGGGATATTAACCCCGATGGAAGTTACAGAAGATGGTATCTTTATCCGCAGGATCCAACTGTATTTTACGATCCTAGAAGGCCTGGCCTTGCTTCTGTTCTTCATTTTCTAACCGCCCTTATGTTGTATGGATACCTAATTCCGATATCACTTTACGTGTCGATTGAGATTGTGAAAGTTCTGCAGAGTATTTTTATCAACAAAGATCAGGAAATGTATTATGAAGAATCAGATAGGCCAGCTCATGCGCGCACGTCAAATTTGAACGAAGAGCTTGGTCAAGTTGATACCATATTGTCTGACAAAACTGGTACTTTGACATGTAACTCTATGGAGTTTGTCAAATGTTCTGTCGGGGCTATTCCATACGGTCGTGGTATTACCGAAGTCGAGAAGGCACTTGCTAAAAGAGGGAAGGACGTTGAATCCCAAGGTGATGCTTATTCGTCTGATTTCTTGAGCCAGAATAGCGACACTGTGGATTCTCAGAAGCCAATTAAGGGATTTAACTTTAAAGACGAACGCATAATGAACGGGCGATGGATTAATGAACCACATCCGGACATCATACAGAAATTTTTTCGAGTGTTAGCTATATGTCATACAGCATTACCTGATCCAGATAAAGAATCGGGAGAAATTTCCTATGAAGCCGAATCACCAGATGAAGCGGCATTTGTCATAGCCGCGAGGGAGCTTGGTTTTGAGTTTTTTGCTAGGACACAAACAAGCATATCGTTGCACGAATTGAATTATGAAAGTGGAAAAAAGGTTGACAGAGTTTACAAGCTTCTGCATATCTTAGAGTTCAGCAGTTCACGCAAACGAATGTCGGTGATAGTGAAAAGTGACGAAAACAAAATATTGCTCCTATGCAAGGGTGCAGACAGTGTTATGTTCGAAAGACTTTCACAATATGGAAGACAGTTTGAGGCCGAAACAAAGAATCATATCAAAAGATATTCTGAGGCAGGTTTAAGAACCCTTGTAATCACGTACCGCGAACTCGGTGAAGAAGAATATAAACTGTGGGACAAGGAGTTCTCAACGGCCAAAACTTCTTTAGCGGCCGATCGTGATGCACTTGTGGATGCAGCTGCTGACAAGATTGAAAGAGAGTTAATACTTCTTGGAGCTACGGCTGTTGAGGATAGACTGCAAAAGGGGGTTCCTGAATGTATTGAAAAGCTTGCTATGgcaggaatcaagttatgggtattgactggggacaaaatggaaactgcagtcaacataggGTATGCTTGTCGTTTACTTAGACAAGACATGAAACAGATAGTGATCACTCTTGATTCACCAGATATCATATCATTGGAGAAACAAGGGAACAAGGAGGCTCTAGTAAAGGCCTCTCAGGAAAGCATTGAGAAGCAAATTAGAGAGGGAATCTTGCAAGTCAAGTCATCAAAAGAGAGTTCAAGTGCAGAAAAGGAAAGTTCTTCATTTGGATTGATAATTGATGGGAGGTCCTTGGACTATTCTCTCAACAACGTTTTGGAGAAGTCATTCTTTCAGTTGGCTATTAATTGCGCTTCTGTCATATGTTGTCGGTCTTCACCAAAACAGAAAGCTCGCGTTACAAAATTGGTGAAATTGGGAACAGGGAAGACAACATTATCAATTGGTGACGGTGCAAATGATGTCGGCATGCTTCAGGAGGCTGATATTGGAGTTGGCATTAGTGGTGCTGAAGGGATGCAGGCTGTAATGGCAAGTGATTACGCAATCGGTCAATTCTGTTTTCTGGAGCATTTGTTGTTGGTACACGGCCACTGGTGTTATAGGCGAATATCAATGATGATATGTTACTTTTTCTATAAAAACATTGCATTTGGATTTACCCTATTTTGGTTTGAGGCATATGCTTCTTTCTCCGGTCAACCTGCTTACAATGATTGGTACATGTCGTTTTACAACGTGTTCTTCACTTCGCTACCGGTAATCGCTCTTGGTGTTTTTGATCAGGATGTTTCTGCTAAACTATGCCGAAAGTATCCGTTTCTATATCTAGAAGGAGTAGAGAACACCCTCTTCAGCTGGCCTCGGATAATCGGCTGGATGCTAAACGGAGTCATTAGTTCCTTGCTCATCTTCTTCTTAACCACTAACTCTGTCTTAAATCAAGCCTTCAGAAAAGACGGTAAAGTGGTAGGTTACGAAATACTCGGTGTCATAATGTACACTTGCGCCGTGTGGGTTGTGAATTGCCAAATGGCACTTTCCATCAACTATTTCACATGGATGCAACATTTTTTCATTTGGGGTAGCATTGCATTTTGGTATGTTTTCTTGGTGATTTATGGTTATGTATCTCCAACCATATCAACTACAGCTTATAGAGTATTTGTTGAATCATGTGCTCCTAGTGCATTATATTGGTTAGTTACTCTTTTTGTTGTTGTATGTGTTCTTCTACCATATTTTTCTTATAGAGCTTTTCAAAGTAGGTTTTCACCAATGTATCATGATATCATACAAAGAAAACAAGTAGAAGGGTGTGAAACTGAGATATGTGATGAGTTACCTAAACAAGTACAAGGAAGGTTAATACATTTGAGAGAAAGATTGAAGCAAAGGGAACCTTGA 3591 0.3837 MPEGGGKKRIHFSKLYSFSCFKSPFKDGHSQIGQKGYSRVVYCNDPDNIEAIQLNYGGNYVSTTKYTVFNFIPKSLFEQFRRVANIYFLIVACVSFSPLAPYNPLSIFAPLVVVIGATTVKEAVEDWRRRKQDIEANNRKVQVYGRNHTFVETRWKKLRVGDVIKVYKDEYFPSDLLLLSSSYEDGVCYVETMNLDGETNLKLKQALEKTTHLNNENSLQNFRAMVECEDPNENLYSFIGTLKYDREEYPHPLSLQQILLRDSKLRNTEYIYGVVIFTGHDTKVMQNSIDPPSKRSKIERKMDKIVYILFSTLILISFIGSLFFGVETKRDINPDGSYRRWYLYPQDPTVFYDPRRPGLASVLHFLTALMLYGYLIPISLYVSIEIVKVLQSIFINKDQEMYYEESDRPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVGAIPYGRGITEVEKALAKRGKDVESQGDAYSSDFLSQNSDTVDSQKPIKGFNFKDERIMNGRWINEPHPDIIQKFFRVLAICHTALPDPDKESGEISYEAESPDEAAFVIAARELGFEFFARTQTSISLHELNYESGKKVDRVYKLLHILEFSSSRKRMSVIVKSDENKILLLCKGADSVMFERLSQYGRQFEAETKNHIKRYSEAGLRTLVITYRELGEEEYKLWDKEFSTAKTSLAADRDALVDAAADKIERELILLGATAVEDRLQKGVPECIEKLAMAGIKLWVLTGDKMETAVNIGYACRLLRQDMKQIVITLDSPDIISLEKQGNKEALVKASQESIEKQIREGILQVKSSKESSSAEKESSSFGLIIDGRSLDYSLNNVLEKSFFQLAINCASVICCRSSPKQKARVTKLVKLGTGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDYAIGQFCFLEHLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQPAYNDWYMSFYNVFFTSLPVIALGVFDQDVSAKLCRKYPFLYLEGVENTLFSWPRIIGWMLNGVISSLLIFFLTTNSVLNQAFRKDGKVVGYEILGVIMYTCAVWVVNCQMALSINYFTWMQHFFIWGSIAFWYVFLVIYGYVSPTISTTAYRVFVESCAPSALYWLVTLFVVVCVLLPYFSYRAFQSRFSPMYHDIIQRKQVEGCETEICDELPKQVQGRLIHLRERLKQREP 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00074 1196 Gene3D - 706 914 IPR023214 -
Car02g00074 1196 Pfam Phospholipid-translocating P-type ATPase C-terminal 904 1154 IPR032630 -
Car02g00074 1196 PRINTS P-type cation-transporting ATPase superfamily signature 428 442 - -
Car02g00074 1196 PRINTS P-type cation-transporting ATPase superfamily signature 876 895 - -
Car02g00074 1196 SFLD Haloacid Dehalogenase 410 927 - -
Car02g00074 1196 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 7 1175 - -
Car02g00074 1196 Pfam Phospholipid-translocating ATPase N-terminal 41 106 IPR032631 -
Car02g00074 1196 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 497 668 IPR023299 GO:0000166
Car02g00074 1196 ProSitePatterns E1-E2 ATPases phosphorylation site. 430 436 IPR018303 -
Car02g00074 1196 SUPERFAMILY HAD-like 423 931 IPR036412 -
Car02g00074 1196 SUPERFAMILY Calcium ATPase, transduction domain A 144 286 IPR008250 -
Car02g00074 1196 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 7 1175 - -
Car02g00074 1196 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 846 958 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car02g00074 1196 CDD P-type_ATPase_APLT_Dnf-like 58 1036 - -
Car02g00074 1196 Gene3D - 112 289 - -
Car02g00074 1196 SFLD p-type atpase 410 927 IPR044492 -
Car02g00074 1196 SUPERFAMILY Calcium ATPase, transmembrane domain M 47 1152 IPR023298 -
Car02g00074 1196 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 56 1162 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Car02g00074 1196 Pfam Cation transport ATPase (P-type) 529 634 - -
Car02g00074 1196 Gene3D - 552 705 IPR023299 GO:0000166
Car02g00074 1196 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00074 Car-Chr2 682701 690689 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00074 10 1167 Primary Pumps ATPases AT3G25610 64.513 0.0 1587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00074 K01530 - gmx:100817020 2013.81