Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00071 ATGGAGACTATTTCAGAAAAACGATATCCTCTCAGCGCAAAAGATTACAAGTTATATGAAGAGGTCGGGGAAGGTGTTAGTGCCTCGGTACATAGGGCTCTCTGCGTTCCTCTCAATGAGATTGTTGCCATCAAGGTTCTCGATCTTGAGAAGTGCAATAACGATTTGGATGGAATTCGGAGAGAGGTACAGACCATGAACTTGATTAATCATTCAAATCTTTTACGGGCATATTGCTCTTTTACTGCTGGACACAGTCTTTGGGTTGTGATGCCATACATGGCTGGGGGCTCTTGCCTTCATATAATGAAATCTTCATTTCCTGAGGGTTTTGAAGAGCCTGTTATTGCAACTGTATTGCGTGAGGTTCTCAAAGCTCTTGTTTATCTCCATGCCCATGGACACATACATAGGGATGTTAAGGCTGGGAATATTTTGCTTGATTCTAATGGTGCAGTCAAACTGGCTGACTTTGGAGTGTCTGCATGTATGTTTGATTCTGGAGATAGGCAGCGTTCAAGAAACACTTTTGTTGGAACACCTTGCTGGATGGCTCCCGAAGTTATGCAGCAACTGCATGGATATGATTTTAAAGCAGATATATGGTCATTTGGTATAACAGCACTTGAACTTGCTCATGGTCATGCTCCATTTTCAAAGTATCCACCAATGAAAGTTTTGCTTATGACTTTGCAGAATGCCCCTCCAAGTCTTAATTATGAAAGAGACAAGAGATTTTCAAAGTCTTTCAAAGAGTTAGTTGCCACCTGCTTAGTGAAAGACCCAAAGAAGCGTCCAAGTGCAGAAAAGCTTTTAAAGCACCACTTCTTTAAACATGCACGTGGCATTGAATATCTAGGTCGCACCATTCTTGATGGCCTTGCTCCATTAGGAGATCGTTTTAGAATGCTGAAGGCTAAAGAGGCAGATTTATTGATGCAGAACAAGGCTGTTTATGAGGATATGGAGCAATTATCTCAGAAAGAATATATCCGAGGAATTAGTGCTTGGAATTTTAACCTGGAAGATTTAAAAAGTCAAGCTGCATTAATTCAAGATGCTGACATGCCAAATGCAGAAGAGCCAGATACAAATGAGAAGAAAAAAGACATATCAAATGACTTAAAGGCTCCAGCAGAGGAGCTATCTACTTCAGATGGTGCGTCCACACAGGACAAGGAGGATGGATTCAACAATCTTCAGGATTTGGAGAGTTCACTTGCTTCGTTTCCTATAAAACCTCTTCAAGCACTCAAAGGTTGTTTTGATGTCTGTGATGATGATGTCAATAATACCAGTCCAAGAGATTTGGATCACAATTATGGAAGAACTGATAATGGAAATTCTGGGACAAGTAGTCTGTCGCCTCAAAATGCTATAACTCAGCCTAAGAAGTTTTGGAGTGGCTCTTTACAACCTGATAATTTTTTTCACAAAAAGATTACTGATGGGGACAGGGATTATCTACAAACAAAATATTCTTCCGAGCGGAATCACAGTGGTCCATTGTTATATCGGCAGAGGAGAGATGTCAACAACCTTCCATTGGTTGATGATACATCAGAAGGAGCAATTGTCCAGCGTAAGGGGCGGTTTAAGGTCACATCAGCAGATCCCAGTTCAATGGGTCTTTCAAACAACTCTTCTGGCCCAGTTGCAGTAACTCCTCCTACCAGTCCCCCAAATCAGAACTTCATGTCTGCTTCTATTCTTCCATCACTGCAGTGCATCTTGCAACAGAATGGCTTGCAGAGAGAAGAAATTATTAAATTGATAAAGTATGCAGAGCAATCTTATGGTAAGAATACAGAATCAATAGAGGCAGGAGCAGTTGATCCTTTGCAGGCACCACCTGTAACAAATAGAGAGCGAGAGCTGTATTTGCAGGTGGTTCAACTCCAACAGAGTATTGGGAGCCTTGCTGAGGAATTGCAGAGACAAAAGATGAAAAATGTTCAGTTAGAGAGGCAGCTGAACAGTATGGCCAACAAAGTTGAAAAGTGA 2004 0.4137 METISEKRYPLSAKDYKLYEEVGEGVSASVHRALCVPLNEIVAIKVLDLEKCNNDLDGIRREVQTMNLINHSNLLRAYCSFTAGHSLWVVMPYMAGGSCLHIMKSSFPEGFEEPVIATVLREVLKALVYLHAHGHIHRDVKAGNILLDSNGAVKLADFGVSACMFDSGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPSLNYERDKRFSKSFKELVATCLVKDPKKRPSAEKLLKHHFFKHARGIEYLGRTILDGLAPLGDRFRMLKAKEADLLMQNKAVYEDMEQLSQKEYIRGISAWNFNLEDLKSQAALIQDADMPNAEEPDTNEKKKDISNDLKAPAEELSTSDGASTQDKEDGFNNLQDLESSLASFPIKPLQALKGCFDVCDDDVNNTSPRDLDHNYGRTDNGNSGTSSLSPQNAITQPKKFWSGSLQPDNFFHKKITDGDRDYLQTKYSSERNHSGPLLYRQRRDVNNLPLVDDTSEGAIVQRKGRFKVTSADPSSMGLSNNSSGPVAVTPPTSPPNQNFMSASILPSLQCILQQNGLQREEIIKLIKYAEQSYGKNTESIEAGAVDPLQAPPVTNRERELYLQVVQLQQSIGSLAEELQRQKMKNVQLERQLNSMANKVEK 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00071 667 MobiDBLite consensus disorder prediction 535 554 - -
Car02g00071 667 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00071 667 SUPERFAMILY Protein kinase-like (PK-like) 14 278 IPR011009 -
Car02g00071 667 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 664 - -
Car02g00071 667 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Car02g00071 667 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 664 - -
Car02g00071 667 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00071 667 Gene3D Transferase(Phosphotransferase) domain 1 97 288 - -
Car02g00071 667 CDD STKc_OSR1_SPAK 14 277 - -
Car02g00071 667 MobiDBLite consensus disorder prediction 538 554 - -
Car02g00071 667 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Car02g00071 667 Coils Coil 630 664 - -
Car02g00071 667 MobiDBLite consensus disorder prediction 443 458 - -
Car02g00071 667 MobiDBLite consensus disorder prediction 432 458 - -
Car02g00071 667 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00071 Car-Chr2 650292 659952 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00071 1 664 MAP Kinase Kinase Kinase Kinase AT5G14720 66.325 0.0 905
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Car02g00071 Pkinase 1e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00071 K08835 - gmx:100778837 1095.88