Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00046 ATGGTGAAAGAGATTGTGGAAAACCTCTGGAATGGTGATAGTGAAGCTCAAATTCAAGCAGCAATGAAACTTAGTAGATTGTGCAATAAGCAAAAGCACAATTTAGCAGAAAGTGGAGTTATGGTTCCTCTGGTTTCCATGCTTCATTCTGAAAACTGTGAAACCATAGAAGCTGCTCTTTATGCTCTTCTTAGCCTCTCCTTTGGCAGTGAAAGAAACAAGATTCAAATCGTCAGGTATGGAGCATTGCCAATTTTGCTGAATCTCCTCCATTGTGAAAGCCAGACAATGGTACAATTGTCCATAGCAGCCATGTTAACACTTTCTTCTTGCAAATCAAATAAGGTAGCAATAGCTTCCTCTGGTGCCATTCAATTTTTGGTTGAATTTATCAATAGTAGTAGTAGTAGCAGCACTCACACTGAATCTCAACTAGATGTTATAGCTACTCTCCATAACCTCACAACCTGCCAAGAGATTATTCCATTGGTTGTATCTTCAGGTGTTATACTCTCATTACTTGAACTTACCCACAACTCAGTAAAATTATCTCCATTGGTTGAAAAAGCAGTAGGGTTGCTAGAAAATATTGTTTCTTCATCAGAGGGTGGACTTTGTGAGGTTGCTAATACTAGCGGAGCGATTCGGATAATGGTTGAGACTATTGAAGATGGATCTTCACTAGGCAAAGAGCATGCAGTTGGTATACTTCTCCTTATATGTCGAAGTTGTAGAGAAAAATATAGAGTACTGATTTTGACAGAGGGAGTGATGCCAGGATTGCTTCAGTTAAGTGTCGATGGAACGCGGAGAGCCAAATCCATGGCTAGAGAATTGTTGTTGCTTCTAAGAGACTGCTCTAGTTATAGCTCGAGACAGAAACAAATTAACCGTGAGCTTGTAGAACAGATAATGGAAGAAATTGATGCAGGAGAGAAATTGGCTGATACCACTTTGAGATTGGTAGAGGAAATGATTGCAAAGCTCAATACATAA 996 0.3946 MVKEIVENLWNGDSEAQIQAAMKLSRLCNKQKHNLAESGVMVPLVSMLHSENCETIEAALYALLSLSFGSERNKIQIVRYGALPILLNLLHCESQTMVQLSIAAMLTLSSCKSNKVAIASSGAIQFLVEFINSSSSSSTHTESQLDVIATLHNLTTCQEIIPLVVSSGVILSLLELTHNSVKLSPLVEKAVGLLENIVSSSEGGLCEVANTSGAIRIMVETIEDGSSLGKEHAVGILLLICRSCREKYRVLILTEGVMPGLLQLSVDGTRRAKSMARELLLLLRDCSSYSSRQKQINRELVEQIMEEIDAGEKLADTTLRLVEEMIAKLNT 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00046 331 SUPERFAMILY ARM repeat 3 313 IPR016024 -
Car02g00046 331 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 317 - -
Car02g00046 331 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 81 123 IPR000225 GO:0005515
Car02g00046 331 Pfam Armadillo/beta-catenin-like repeat 29 67 IPR000225 GO:0005515
Car02g00046 331 Pfam Armadillo/beta-catenin-like repeat 71 99 IPR000225 GO:0005515
Car02g00046 331 SMART arm_5 28 68 IPR000225 GO:0005515
Car02g00046 331 SMART arm_5 111 156 IPR000225 GO:0005515
Car02g00046 331 SMART arm_5 70 110 IPR000225 GO:0005515
Car02g00046 331 SMART arm_5 157 199 IPR000225 GO:0005515
Car02g00046 331 Gene3D - 140 308 IPR011989 -
Car02g00046 331 Gene3D - 1 139 IPR011989 -
Car02g00046 331 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 168 203 IPR000225 GO:0005515
Car02g00046 331 PANTHER U BOX DOMAIN-CONTAINING 2 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00046 Car-Chr2 437741 439400 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00046 1 285 U-box Gene Family AT2G23140 32.990 1.44e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00046 - - gmx:100778534 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00046 02 437741 439400 Car02g00046 02 437741 439400 ECH