Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00044 ATGGAGTCACCTATCAATGAAGTTGAGTCTATATCAGAGGTTCAGAATTCAGTTTCTGGTGTACCGAAATGCCACAGCCTTCCTTTAACATCAGGGACTCCCCGTCCTTCGCGGCCTCCGTTGAGAGCATCTCGAAATCACGGAGCTTCTTCATCTTCTTCCACGTCGTACTTGGCTGGCCATCATAATTATGGAACAAAGACCATCCACCATGTAAACAGCCATGTAATTAATCAAAAGCATTTAGAACATGAAGGATTGCCAACAAAACTATGCAGCAAACAAAAAGTGTTTGATGAATCCGACAATTGTATCTTAGTTCCATCGAAACGAGCTGTTGTTAATCAAGCGAAAAATTACTGTCAGTCAGAGGTTAGTTTTTGTTTAAGTCCTCAGAATAGTTTCTATTCAGCAACTGTCTATTCAGAGGCGAAACAAAGTTTCACCAATACTGAAGTTAGTGAGTGTGCTAGTGCTGATAATAAGTCTTGTGAAAGTGGAGAAATTTCGAATTCGTGTGATTTTAACGAGAGTAGGAAAACTAGTATCTGTAGAGCGAGTACTGGAAGTGATGTTAGCGACGAAAGCAGCACGAGTAGTTTGAGCACTGCTTTGTATAAACCTCATAAGGCAAATGATATAAGATGGGGAGCGATTCAAGCTATTCGAGCTCGCGATGGCATGTTGGAAATGAGGCATTTTAGGTTGTTGAAGAAATTAGGATGTGGAGACATAGGAAGTGTATATCTAGCTGAATTGAGCGGCACAAGGACTACTTTTGCTATGAAACTCATGAACAAAGCCGAGCTTGCAGGACGCAAGAAGCTTCTTAGGGCGCAGACAGAGAGAGAGATATTGCAGTCTTTAGATCATCCTTTTTTACCTACATTATATACACACTTTGAGACTGAGACATTCTCTTGCTTGGTAATGGAGTTTTGTCCCGGCGGTGACCTACACGCACTCAGACAAAGACAACCCGGGAAGTTTTTCTCAGAGCATGCTGTCAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTACTTACACATGCTTGGTATAATCTATAGAGACCTTAAACCTGAGAATGTGTTGGTGAGAGAAGATGGTCATATAATGCTATCTGATTTCGATCTCTCTCTAAGGTGCACCGTCAGTCCAACTCTCGTGAAGTCCTCAAACCCGATCGCTGAAACAAAAAGCTCTGGATACTGCATTCAGCCTGCCTGCGCAATGCAGCCAGACTGCATCCAACCTGCATGCTTTTCGCCACGTTTCCTATCCGGAAAATCGAAGAAAGAAAGAAAATTCAGACCAAAGAATGATATGCATCATCACCAAGTGACACCTCTTCCTGAGCTAATCGCGGAGCCAACAAGTGCGCGATCAATGTCCTTTGTAGGTACACACGAGTACTTGGCGCCTGAAATAATTAAAGGCGAAGGACATGGCAGTGCTGTGGACTGGTGGACGTTTGGGATATTCTTATATGAACTCTTGTTTGGGCGAACACCGTTCAAAGGTTCGGCCAACCGAGCAACACTGTTTAATGTTGTCGGGCAGCCGTTGAGGTTTCCGGAATCTCCTACTGTCAGCTTTGCTGTGAGGGACTTGATCAGAGGTTTACTTGTGAAAGAGCCTCAACACCGTCTTGCCTATAGACGTGGAGCTACGGAAATCAAACAACATCCTTTCTTTCACAATGTGAATTGGGCGCTGATCCGTTGCGCTAATCCGCCGGAGGTACCGAGACAGACCATGATGAGACCTAATTCAACTGATCAAGAACTTGGTGTCAACCCTTCTGGCAATTATTTAGATATTGATTTCTTTTGA 1839 0.4372 MESPINEVESISEVQNSVSGVPKCHSLPLTSGTPRPSRPPLRASRNHGASSSSSTSYLAGHHNYGTKTIHHVNSHVINQKHLEHEGLPTKLCSKQKVFDESDNCILVPSKRAVVNQAKNYCQSEVSFCLSPQNSFYSATVYSEAKQSFTNTEVSECASADNKSCESGEISNSCDFNESRKTSICRASTGSDVSDESSTSSLSTALYKPHKANDIRWGAIQAIRARDGMLEMRHFRLLKKLGCGDIGSVYLAELSGTRTTFAMKLMNKAELAGRKKLLRAQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPGKFFSEHAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKSSNPIAETKSSGYCIQPACAMQPDCIQPACFSPRFLSGKSKKERKFRPKNDMHHHQVTPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPTVSFAVRDLIRGLLVKEPQHRLAYRRGATEIKQHPFFHNVNWALIRCANPPEVPRQTMMRPNSTDQELGVNPSGNYLDIDFF 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00044 612 SMART serkin_6 234 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00044 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 355 367 IPR008271 GO:0004672|GO:0006468
Car02g00044 612 Gene3D Phosphorylase Kinase; domain 1 232 317 - -
Car02g00044 612 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 100 612 - -
Car02g00044 612 MobiDBLite consensus disorder prediction 44 59 - -
Car02g00044 612 MobiDBLite consensus disorder prediction 1 32 - -
Car02g00044 612 ProSiteProfiles Protein kinase domain profile. 234 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00044 612 Gene3D Transferase(Phosphotransferase) domain 1 462 585 - -
Car02g00044 612 CDD STKc_phototropin_like 232 585 - -
Car02g00044 612 PANTHER FLIPPASE KINASE 1-RELATED 100 612 - -
Car02g00044 612 SUPERFAMILY Protein kinase-like (PK-like) 214 594 IPR011009 -
Car02g00044 612 MobiDBLite consensus disorder prediction 1 59 - -
Car02g00044 612 Pfam Protein kinase domain 235 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00044 612 Pfam Protein kinase domain 464 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00044 612 Gene3D Transferase(Phosphotransferase) domain 1 318 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00044 Car-Chr2 430443 433598 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00044 141 612 AGC Kinase Gene Family AT5G47750 69.960 0.0 690
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Car02g00044 Pkinase 3.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00044 K08286 - gmx:100810909 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00044 02 430443 433598 Car02g00044 02 430443 433598 ECH