Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00031 ATGATGGCCTCAAATTCTCCATGTGCTGCATGCAAGTTTCTAAGAAGGAAATGCAATCAAGATTGTATCTTTGCACCTTATTTTCCACCAGAAGAGCCTCATAAATTTGCAAATGTTCACAAAATATTTGGTGCAAGCAATGTGAGTAAAATATTAAATGAAGTTTTACCTCATCAAAGGGAGGATGCAGTGAATTCTCTAGCTTATGAAGCTGAAGCAAGAATTAAAGATCCAGTTTATGGTTGTGTTGGAGCAATTTCAGTGCTCCAAAGACAACTCATTAGGCTTCAAAAAGAACTTGATGCTACTAATGCTGATTTGATCCGTTTTAGTACTAATCAAGGTTCTTCTTTTTTTAATTACCCTTCTAATTGGAACAATGATTCTTAG 390 0.3513 MMASNSPCAACKFLRRKCNQDCIFAPYFPPEEPHKFANVHKIFGASNVSKILNEVLPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQLIRLQKELDATNADLIRFSTNQGSSFFNYPSNWNNDS 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00031 129 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 114 - -
Car02g00031 129 Coils Coil 86 106 - -
Car02g00031 129 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Car02g00031 129 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Car02g00031 129 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25 3 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00031 Car-Chr2 321604 323156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00031 4 116 AS2 family AT3G27650 81.416 5.56e-69 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car02g00031 LOB 2.4e-42 No_clan