Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00022 atgttatcaaaagttcaacacaaaaatttggtcaagTTTATTGGAGCCTGCAAAGAACCTGTGATGGTTATAGTAACTGAGCTTCTATTAGGTGGAACGTTGCGCAAATATCTTTTGAGTATGCGACCGAAGTGCTTGGATATGCGTGTGGCTGTTGGATTTGCTCTTGATATTGCCCGAGCAATGGAATGCTTACACTCTCACGGGATCATTCACCGCGACCTTAAACCTGATAACTTGATCTTGACCGGAGATCATAGGACAGTTAAACTTGCTGATTTCGGTCTAGCCAGAGAGGAATCCTTAACAGAGATGATGACTGCCGAAACAGGAACATATCGTTGGATGGCTCCCGAACTTTACAGCACTGTTACTCTAAGACAAGGTGAGAAGaagcattacaaccataaagtggatgcttacagctttgcaattgtgttgtgggaactCATCCATAACAAGTTGCCCTTTGAAGGCATGTCTAATCTGCAGGCGGCGTATGCTGCTGCTTTTAAGAATACAAGGCCTAGTGCTGAAGACCTTCCAGAGGATTTAGCTATGATTGTAACCTCATGCTGGAAAGAGGATCCAAACGATCGGCCAAATTTTAGTCAAATAATACAGATGCTCCTTCGGTATCTCTCAACCATTTCGCCAACAGAACCAGTTGTTCCGATGCGTATAGCTTCATCTGAGAATATCATATTGCCACCAGAATCTCCTGGTACAAGTGCATTAATGTTTCGAAGAGATGATTCCGGAGAAACCACAAAAGGCAATGTGGAAGAGAGGTCCAAAGGGTATTTCTTCTGCTTCAACCAATGTTATTGA 831 0.3899 MLSKVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLSMRPKCLDMRVAVGFALDIARAMECLHSHGIIHRDLKPDNLILTGDHRTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELIHNKLPFEGMSNLQAAYAAAFKNTRPSAEDLPEDLAMIVTSCWKEDPNDRPNFSQIIQMLLRYLSTISPTEPVVPMRIASSENIILPPESPGTSALMFRRDDSGETTKGNVEERSKGYFFCFNQCY 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00022 276 Gene3D Transferase(Phosphotransferase) domain 1 1 218 - -
Car02g00022 276 Pfam Protein tyrosine and serine/threonine kinase 1 210 IPR001245 GO:0004672|GO:0006468
Car02g00022 276 SMART serkin_6 1 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00022 276 PRINTS Tyrosine kinase catalytic domain signature 26 39 IPR001245 GO:0004672|GO:0006468
Car02g00022 276 PRINTS Tyrosine kinase catalytic domain signature 64 82 IPR001245 GO:0004672|GO:0006468
Car02g00022 276 PRINTS Tyrosine kinase catalytic domain signature 181 203 IPR001245 GO:0004672|GO:0006468
Car02g00022 276 PRINTS Tyrosine kinase catalytic domain signature 138 160 IPR001245 GO:0004672|GO:0006468
Car02g00022 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 70 82 IPR008271 GO:0004672|GO:0006468
Car02g00022 276 PANTHER PROTEIN KINASE ATN1 1 253 - -
Car02g00022 276 ProSiteProfiles Protein kinase domain profile. 1 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00022 276 CDD STKc_MAP3K-like 1 210 - -
Car02g00022 276 SUPERFAMILY Protein kinase-like (PK-like) 1 235 IPR011009 -
Car02g00022 276 PANTHER SERINE-THREONINE PROTEIN KINASE 1 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00022 Car-Chr2 248389 252959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00022 1 276 MAP Kinase Kinase Kinase AT5G50180 79.348 8.03e-170 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Car02g00022 PK_Tyr_Ser-Thr 4.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00022 - - mnt:21403469 504.982