Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00017 ATGTCTTCATCTTCCAGTACTACTTGGAGTGTGGAAGACAACAAAGCATTTGAAAAGGCTCTAGCAGTTTATGACAAGGACACACGTGATCGTTGGTACAACATTGCTAAGGCTGTTACTGGAAAAACTCCTGAACAAGTCAAGACTCACTATCAACTCCTTCTACACGACATTCATCTTATTGAATCAGGACAAGTTCCCTTTCCACTCTACACCAGCTCCAAACAAACCACTTAA 237 0.4135 MSSSSSTTWSVEDNKAFEKALAVYDKDTRDRWYNIAKAVTGKTPEQVKTHYQLLLHDIHLIESGQVPFPLYTSSKQTT 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00017 78 ProSiteProfiles Myb-like domain profile. 1 55 IPR001005 -
Car02g00017 78 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 2 76 - -
Car02g00017 78 SUPERFAMILY Homeodomain-like 7 63 IPR009057 -
Car02g00017 78 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 76 IPR044636 GO:0003700
Car02g00017 78 Gene3D - 1 68 - -
Car02g00017 78 CDD SANT 12 55 IPR001005 -
Car02g00017 78 SMART sant 5 57 IPR001005 -
Car02g00017 78 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00017 Car-Chr2 213555 214272 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car02g00017 Myb_DNA-binding 5.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00017 - - mnt:21401518 111.309