Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02927 ATGAGACTTCTCTTATTCTCTTCCATCTTGTATATGTATTTGTATGGTGTTACTGTTACTGTTACTTCACTCAACTCAGATGGAGTGGCTCTCTTGTCATTCATCTCTCACTGGACATCACTACCTCCTTCCATAAACTCCTCATGGAATGCCTCACATTCCACACCATGCTCATGGCTTGGAGTTAAATGTGACCCTTCCCACCATGTACTCTCTCTTAACCTCGCTGATTATGACATTTCTGGTCAACTTGGACCTGAAATTGCTAATTGCACCCACCTCAAACACTTAGACCTTACTGCTAACTCTTTCACCGGTCAAATACCTAACTCATTCAACAACTTTCACACCCTCACCTATCTCAGCCTTTCTAATAATTTTCTCACTGGTCCATTTCCTCACTCCTTGACTCAAATCCCTCACCTCCACCTTCTTGATCTCTCTTATAACACTTTTACAGGTCCCATCCCAACCACTATTTCCAACATCACTCAACTCCGTTACCTGTATCTCCAAAGTAACCACTTTTCTGGTACAATTCCTTCATCCATTTCCAACTGCACTCAACTTCAAGACTTGTTTTTGAATTCTAACCAATTGCAGGGTGTCCTTCCTCACACTCTTAACAATCTCCATCATCTACTTCGTTTTGATGTTGCCGTCAATACTCTAATAGGTACCATTCCATTAATGAGTTCTTCCTTTTGTCAAAATTTACTGTTTTTGGATATATCATACAATTTCTTTAGTGGAGGCATTCCCTCAAGCATTGGGAATTGTACTTATTTATCACAATTTGCTGCTGTGGATTGTAACTTGGTTGGAACTATTCCATCCTCCATTGGTAAGCTCAAAAAGCTATCCCTTCTACGCCTTTCTGTGAACCATTTGTCAGGAAAAATACCTCCGGAAATCGGTAACTGCAAGTCTTTGAATGAGTTGCACTTGTATTCCAACCGACTTGAGGGAAACATTCCAAGTGAAATTGGAAAACTGAGTGAATTGAAGGACCTTGAATTGTTTTCAAACCAATTGAGAGGTGAAATTCCACTTGGAATATGGAAGATTTCAAGTCTTGAGCATCTAATTGTGTATAATAATACCCTTTCTGGGGAACTTCCTTTGGAGATGACAGAGCTCAAGCACCTCAAAAATATCTCATTGTTTAACAACATGTTCTCTGGAGTCATACCACAAACCTTGGGAATGAATAGCAGTTTTTTGCTATTGGACTTCACAAATAACAGGTTCACTGGCAACCTCCCACTAAATCTTTGTTTTGGCAAAAAGTTGAGAGTTCTGAATATGGGAATCAATCAACTTCAAGGTAGCATACCTCCTGATGTTGGAACCTGTACAACTCTAAGAAGACTCATTCTTAAACATAACAACTTCACTGGACCTCTTCCTCCTTTTGAAAGCAATCCCAATCTCTTATTCATTGATATCAGCAACAACAAAATCCATGGTTCCATTCCATCCACTTTGGGAAACTGCACGAATCTCACTGACTTTATTTTTTCAGATAACCAATTTAGCGGGCCTATACCTTCAGAGATAGGAAACCTCGTCAATCTTCGGACTCTTAATCTTGCTCACAACAACTTAGAAGGTCCTTTGCCATTTCAGCTTTCAAACTGTACCAAAATGGACAAGTTTGATGTGGGATTTAATTTCTTGAATGGTTCACTGCCATCAAGTTTGCAGAGGTGGACAAGGATAAACACATTAATTTTGAGAGAGAATCAATTTAGTGGCGGCATTCCAGTTTTCTTGTCGGTATTTTCAGATCTTTCTGAACTACATATTGGTGGGAATATGTTTAGAGGAAGAATTCCTAGATCCATTGGGGCATTGCATAATTTGATCTATGGGTTGAATCTAAGTTCTAATGAGCTGATAGGTGACATTCCTGTGGAAATTGGAAACTTGAAAACATTGCAAGTGCTGGATCTATCTCAGAACAATTTGACAGGAAGCATACAAGTTCTTGATGAACTCCCTTCATTACTTCAAATCAATATTTCATACAATTCTTTTCAGGGACCCATACCAAATATGCTAATGAAGCTGCTTAATTCTCCCATGTCATCATTTTTGGGGAATTCTGGGCTATGTATCCGTTGTTCACCATCCAATAGCTTGGTTTGCACCGAAAGCAGCCATCTAAAACGATGCGATACTGATATCAAAACACTTAATCACAAAGGCCTTGGTAAAGTTGCAACCGTGATGATAGCTCTTGGATCCTCAATATTTGTTGTTTTGCTGTTGTTGGGATTAGTTTATGTTATCGCTTTTGGCAGAAAATCTAAGCAGCAGCAGCAAGTCCATATCGATGCTCATGGAGGTTCTTCGTCACTTCTTAACAAAGTCATGGAGGCTACATCGAACCTAAGTGATCGGTATATTATTGGCAGAGGAGCCCATGGAGTTGTTTATAAAGCCCTAGTAGACCAAGACAAAGCTTTTGCTGTAAAGAAGTTAGCATTTGCTGCTAGCAAAGGTAAGAACTTGAGCATGGTCAGAGAAATTCGAACCCTTGGACAAATTAGGCATCGAAATCTGGTGAAACTGGAAAACTTTTGGTTAAGAAAAGATTATGGTCTGATTCTGTATACCTACATGCCAAATGGAAGCCTTTATGATGTATTGCATGAAAAGAAACCACCACCATCTTTAGAGTGGAATGTCCGATATAAGATAGCTGTTGGAATTGCTCATGGGTTGGCTTATCTTCATTATGACTGTGATCCTCCCATAGTGCACCGAGACATCAAACCAAACAACATACTTCTAGACTCTGATATGGAACCACACATTGCTGACTTTGGTATTGCCAAACTTTTGGACCAATCTTCTACTTCAATTCCTTCCTTATCTGTGCTGGGCACAATTGGTTATATTGCACCAGAGAATGCTTACACAACAGCAAGTACGAGGGAGTGTGATGTGTACAGTTATGGGGTAGTTTTGCTTGAGCTGATAACCAGAAAGAAAGTAGCAGATCACTCATTTATGGAGGGTACTGATTTAGTGGGATGGGTTAGATCCGTGTGGACTGAAACAGGAGAAATAAATCAAATTGTTGATTCAAGCCTTGTAGATGAATTTTTAGATACTAACATAATGGAAAATGTTACCAAAGTACTTATGGTGGCTTTGAGATGTACTGAGCAGGATCCACACAAGAGGTCCACAATGACAGATGTTACCAAGCAATTATCAGATTCTTCTAATTCACAGAAAATAAGTAAGAAGGGCTAA 3267 0.3939 MRLLLFSSILYMYLYGVTVTVTSLNSDGVALLSFISHWTSLPPSINSSWNASHSTPCSWLGVKCDPSHHVLSLNLADYDISGQLGPEIANCTHLKHLDLTANSFTGQIPNSFNNFHTLTYLSLSNNFLTGPFPHSLTQIPHLHLLDLSYNTFTGPIPTTISNITQLRYLYLQSNHFSGTIPSSISNCTQLQDLFLNSNQLQGVLPHTLNNLHHLLRFDVAVNTLIGTIPLMSSSFCQNLLFLDISYNFFSGGIPSSIGNCTYLSQFAAVDCNLVGTIPSSIGKLKKLSLLRLSVNHLSGKIPPEIGNCKSLNELHLYSNRLEGNIPSEIGKLSELKDLELFSNQLRGEIPLGIWKISSLEHLIVYNNTLSGELPLEMTELKHLKNISLFNNMFSGVIPQTLGMNSSFLLLDFTNNRFTGNLPLNLCFGKKLRVLNMGINQLQGSIPPDVGTCTTLRRLILKHNNFTGPLPPFESNPNLLFIDISNNKIHGSIPSTLGNCTNLTDFIFSDNQFSGPIPSEIGNLVNLRTLNLAHNNLEGPLPFQLSNCTKMDKFDVGFNFLNGSLPSSLQRWTRINTLILRENQFSGGIPVFLSVFSDLSELHIGGNMFRGRIPRSIGALHNLIYGLNLSSNELIGDIPVEIGNLKTLQVLDLSQNNLTGSIQVLDELPSLLQINISYNSFQGPIPNMLMKLLNSPMSSFLGNSGLCIRCSPSNSLVCTESSHLKRCDTDIKTLNHKGLGKVATVMIALGSSIFVVLLLLGLVYVIAFGRKSKQQQQVHIDAHGGSSSLLNKVMEATSNLSDRYIIGRGAHGVVYKALVDQDKAFAVKKLAFAASKGKNLSMVREIRTLGQIRHRNLVKLENFWLRKDYGLILYTYMPNGSLYDVLHEKKPPPSLEWNVRYKIAVGIAHGLAYLHYDCDPPIVHRDIKPNNILLDSDMEPHIADFGIAKLLDQSSTSIPSLSVLGTIGYIAPENAYTTASTRECDVYSYGVVLLELITRKKVADHSFMEGTDLVGWVRSVWTETGEINQIVDSSLVDEFLDTNIMENVTKVLMVALRCTEQDPHKRSTMTDVTKQLSDSSNSQKISKKG 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02927 1088 ProSitePatterns Protein kinases ATP-binding region signature. 805 828 IPR017441 GO:0005524
Car01g02927 1088 Gene3D Transferase(Phosphotransferase) domain 1 876 1087 - -
Car01g02927 1088 Gene3D Ribonuclease Inhibitor 328 428 IPR032675 -
Car01g02927 1088 Gene3D Phosphorylase Kinase; domain 1 764 875 - -
Car01g02927 1088 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 12 159 - -
Car01g02927 1088 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 616 661 - -
Car01g02927 1088 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 664 1083 - -
Car01g02927 1088 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 140 281 - -
Car01g02927 1088 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 275 620 - -
Car01g02927 1088 ProSiteProfiles Leucine-rich repeat profile. 646 668 IPR001611 GO:0005515
Car01g02927 1088 SMART LRR_typ_2 644 667 IPR003591 -
Car01g02927 1088 SMART LRR_typ_2 332 356 IPR003591 -
Car01g02927 1088 SMART LRR_typ_2 163 187 IPR003591 -
Car01g02927 1088 SMART LRR_typ_2 188 210 IPR003591 -
Car01g02927 1088 SMART LRR_typ_2 284 308 IPR003591 -
Car01g02927 1088 SMART LRR_typ_2 523 547 IPR003591 -
Car01g02927 1088 ProSitePatterns Serine/Threonine protein kinases active-site signature. 921 933 IPR008271 GO:0004672|GO:0006468
Car01g02927 1088 Gene3D Ribonuclease Inhibitor 235 327 IPR032675 -
Car01g02927 1088 ProSiteProfiles Protein kinase domain profile. 799 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02927 1088 SUPERFAMILY L domain-like 49 424 - -
Car01g02927 1088 SMART serkin_6 799 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02927 1088 SUPERFAMILY RNI-like 351 706 - -
Car01g02927 1088 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Car01g02927 1088 Pfam Protein kinase domain 804 1073 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02927 1088 Gene3D Ribonuclease Inhibitor 23 174 IPR032675 -
Car01g02927 1088 PANTHER OS08G0446200 PROTEIN 140 281 - -
Car01g02927 1088 PANTHER OS08G0446200 PROTEIN 12 159 - -
Car01g02927 1088 PANTHER OS08G0446200 PROTEIN 664 1083 - -
Car01g02927 1088 PANTHER OS08G0446200 PROTEIN 616 661 - -
Car01g02927 1088 PANTHER OS08G0446200 PROTEIN 275 620 - -
Car01g02927 1088 Pfam Leucine rich repeat 93 150 IPR001611 GO:0005515
Car01g02927 1088 SUPERFAMILY Protein kinase-like (PK-like) 786 1075 IPR011009 -
Car01g02927 1088 Gene3D Ribonuclease Inhibitor 175 234 IPR032675 -
Car01g02927 1088 Gene3D Ribonuclease Inhibitor 429 715 IPR032675 -
Car01g02927 1088 SMART LRR_sd22_2 187 213 - -
Car01g02927 1088 SMART LRR_sd22_2 115 141 - -
Car01g02927 1088 SMART LRR_sd22_2 644 666 - -
Car01g02927 1088 SMART LRR_sd22_2 332 361 - -
Car01g02927 1088 MobiDBLite consensus disorder prediction 1063 1088 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02927 Car-Chr1 54210813 54214387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02927 19 1077 Receptor kinase-like Gene Family AT1G73080 50.916 0.0 1018
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car01g02927 Pkinase 6.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02927 - - gmx:100778035 1517.29