Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02924 ATGGCGCTGGAAGAAGAAAAGGAAATAATTTTCAGGTCGAAGCTTCCAGATATATACATCCCAAACCACCTTCCCCTCCATTGTTATTGTTTTGAGAACCTCTCAGAATATGGTTCACGTACTTGTCTCATTAATGCACCCACCGGAACACACTACACCTATTCCGACGTACAACTCACCTCTCGTAGAGTAGCCTCCGGTCTCCACAATTTGGGAGTCCAACAAGGTGACGTCATCATGATCCTCCTCCCCAATTCCCCTGAATTTGTCTTCTCCTTTCTTGCCGCTTCTTATCTAGGTGCCATAGCCACCGCCGCCAATCCCTTCTTCACGGCGGCAGAAATTGGTAAGCAAGTAAAAGCCTCCAACGCCAAGTTGCTGATAACACAAGCATGTTACTACCAAAAAGTGAAGGCGTTGTTGAAGGTGGAGAGTGAGGATGATGATGTGATAAATAATAATAATAATAATAAGAAGAAGAAGAAGAAGGTGGTGTTGGTAGACTCTCTCTCTAACGTGGATGATGATGATGACGACGACGATGTTGAGGTGCATTATTTCTCAAGTGTAAGCGAGGGTGACGAGAATGAAGTGGGAGAAGTGAAGATAGAAGGTGATGACGTGGTGGCTCTTCCGTATTCATCAGGAACAACAGGTCTACCAAAAGGTGTGATGTTAACACACAAAGGATTGGTGAGTAGCATAGCACAGCAGGTGGATGGAGAGAATCCAAATCTATATTACACATGCGATGATGTCATACTCTGTGTGCTTCCTCTGTTTCACATTTACTCTCTCAACTCTGTTTTGCTATGTGGACTTAGAGCCAAATCTACCATTCTTCTCATGCCAAAATTCGAAATCAATGCCTTCCTTACTCTCGTTCACAAACATCGAGTCACTGTTGCACCTGTTGTTCCACCCATTGTATTGGCAATTGCTAAATCACCAGATCTTCAAAACTATGATCTCTCTTCAATTAGAATATTGAAATCCGGGGGTGCTCCACTTGGTAAAGAACTCGAACATACTGTAAGGGCCAAATTCCCCAACGCAATTCTTGGACAGGGATATGGAATGACTGAGGCAGGGCCAGTGCTAACAATGAGCTTAGCGTTTGCAAAAGAAGCTGTGAATGTAAAAGCAGGTGCATGTGGAACAGTTGTAAGAAATGCAGAGATGAAAATTGTGGACCCAGAAACCGGTCATTCTTTACCTCGAAACCAATCCGGTGAAATCTGCATAAGAGGCCACCAGATCATGAAAGGTTATCTAAATGATCGAGAGGCTACAGAGAGAACAATAGACAAAGAAGGTTGGTTGCATACAGGTGATATTGGATATATCGACGAAGACGATGAACTATTCATTGTTGATAGATTGAAGGAATTGATTAAATACAAAGGATTTCAAGTGGCTCCAGCTGAACTCGAAGCTCTTCTTCTTTCACATCCCAAAATATCTGATGCTGCTGTTGTTCCAATGAAGGATGAAGCGGCTGGAGAGGTGCCTGTTGCATTTGTGGTGAGATCAAATGGTTACACTGACTTAACCGAGGATCAAATTAAACAATTTATTTCCAAACAGGTCGTGTTTTACAAAAGAATAAATCAAGTATTCTTCATTGATGCCATTCCCAAGTCACCGTCTGGCAAAATCTTGCGCAAGGATCTCAGAGCAAAGTTAGCAGCACCTCTTCCAAATTGA 1707 0.4277 MALEEEKEIIFRSKLPDIYIPNHLPLHCYCFENLSEYGSRTCLINAPTGTHYTYSDVQLTSRRVASGLHNLGVQQGDVIMILLPNSPEFVFSFLAASYLGAIATAANPFFTAAEIGKQVKASNAKLLITQACYYQKVKALLKVESEDDDVINNNNNNKKKKKKVVLVDSLSNVDDDDDDDDVEVHYFSSVSEGDENEVGEVKIEGDDVVALPYSSGTTGLPKGVMLTHKGLVSSIAQQVDGENPNLYYTCDDVILCVLPLFHIYSLNSVLLCGLRAKSTILLMPKFEINAFLTLVHKHRVTVAPVVPPIVLAIAKSPDLQNYDLSSIRILKSGGAPLGKELEHTVRAKFPNAILGQGYGMTEAGPVLTMSLAFAKEAVNVKAGACGTVVRNAEMKIVDPETGHSLPRNQSGEICIRGHQIMKGYLNDREATERTIDKEGWLHTGDIGYIDEDDELFIVDRLKELIKYKGFQVAPAELEALLLSHPKISDAAVVPMKDEAAGEVPVAFVVRSNGYTDLTEDQIKQFISKQVVFYKRINQVFFIDAIPKSPSGKILRKDLRAKLAAPLPN 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02924 568 Pfam AMP-binding enzyme C-terminal domain 476 552 IPR025110 -
Car01g02924 568 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 5 563 - -
Car01g02924 568 ProSitePatterns Putative AMP-binding domain signature. 211 222 IPR020845 -
Car01g02924 568 Pfam AMP-binding enzyme 33 467 IPR000873 -
Car01g02924 568 Gene3D - 462 564 IPR045851 -
Car01g02924 568 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 563 - -
Car01g02924 568 Gene3D - 4 461 IPR042099 -
Car01g02924 568 SUPERFAMILY Acetyl-CoA synthetase-like 14 564 - -
Car01g02924 568 CDD 4CL 20 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02924 Car-Chr1 54182095 54185937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02924 8 530 Monolignol Biosynthesis Gene Families AT1G51680 67.043 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02924 K01904 - gmx:100819192 832.402