Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02923 ATGCACGCCTTAGTGTTCTTCTTCTTCTTCTCCCTTGGTAGTGGTACTAATAATAATATTATAGTATCCAAAGATGGGAGCAGTGGAAATTATACAACCGTGGGTGAAGCTATCGCGAATGCCCCGGATTTGAATCCCGAACTTTACACAATTCACGTTTTAGCAGGCATTTATGAAGAGTACATTCTCATTCCACCTCACAAGATTAATATTAAGCTCCTAGGAGATGGTCCAAACCACACAATTATACTTGCTCACCAAAATGGTTCCACCATAGACATCCGTGGAGAAGGATTTATGGCACAAAACATGGGATTTGTGAACTCGGCAGGGCTAGATGCAAGCGCTGCAGTGGCCGTTCGGAACGAAGCAAACAATAGCGTATTCTTTCAATGCTCCATCCAAGGATTCCAAGACACTTTGTGGGCGGTTTCCGGTAGACAGTTTTACAAAAATTGTGATATCTACGGCACCGTCGACTTCATCTACGGCAACGCTGCTGCGGTATTTCAAGATTGTATGGTTTACGCACGCTATCGACAGTACGTGACATTCACCGCTCAGTCACGTGAGGATCCATATGAGAACACAGGTTTCACATTCCAACGTTGCAATTTCAGCATGTCACCTGAGGATGAGGACAGAAAATCAGAGGTGTATGCCACCTTGGGTCGTCCATGGAGGGCCTATTCAACAGTTGCTATATTACAATCTTACATAGACTCCATGGTGGATCCTAAAGGTTGGGAAGAGATGCCGGGCCAGCCCACCGATAAGGTCACCTATGTGGAGTTTCAGAATGTTGGGCCTGGTTCTAACACTTATGGTAGAGTGGATTGGCCTGGTGTAACACTCCTTACCCATCCAAATCAAGCACTACCTTTCACTGCTTCCTATCTCTTAGATGCTGACTCTTGGATTCCCTCCAGAGGTGTTCCTTACGATAATGGACTATAG 957 0.4535 MHALVFFFFFSLGSGTNNNIIVSKDGSSGNYTTVGEAIANAPDLNPELYTIHVLAGIYEEYILIPPHKINIKLLGDGPNHTIILAHQNGSTIDIRGEGFMAQNMGFVNSAGLDASAAVAVRNEANNSVFFQCSIQGFQDTLWAVSGRQFYKNCDIYGTVDFIYGNAAAVFQDCMVYARYRQYVTFTAQSREDPYENTGFTFQRCNFSMSPEDEDRKSEVYATLGRPWRAYSTVAILQSYIDSMVDPKGWEEMPGQPTDKVTYVEFQNVGPGSNTYGRVDWPGVTLLTHPNQALPFTASYLLDADSWIPSRGVPYDNGL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02923 318 PANTHER PECTINESTERASE 4 317 - -
Car01g02923 318 Gene3D - 13 318 IPR012334 -
Car01g02923 318 Pfam Pectinesterase 19 303 IPR000070 GO:0030599|GO:0042545
Car01g02923 318 PANTHER PECTINESTERASE 4 317 - -
Car01g02923 318 SUPERFAMILY Pectin lyase-like 14 316 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02923 Car-Chr1 54178740 54180262 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02923 12 318 Carbohydrate Esterase AT3G10720 42.378 1.79e-78 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02923 K01051 - gmx:102665195 452.981