Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02913 ATGCCTTCAAGACAATTCCCTTCTACAAGTTCCAGTTTTTTTACCAAACCCAAGTTTCTTTTCATAGCACTAACCATTTCAGCTTCTGTTGTCATTTTCTTCTCAATCCTTTACTTCCTTTACCATCTTTGGCATTCACTTGTGCACAGAGCAAAAACTATTCCTTTTGATGCAAGTGCTCCTTTGAAGCTCCAAAGATTCTCCTACAAGGATTTAAAGCTAGCCAGCAATGGCTTTGACTCTGCCAATGTCATTGGCAAAGGTGGTTCTGGTACTGTTTTCAAGGGAGTGCTTAAAGATGGAAAATTCATTGCCATCAAGCGCTTGGACTCATTGTCTTTGCAATCTGAGAGAGAGTTTCAAAATGAGTTGCAGATTCTTGGAGGGTTGAGATCACCTTTCTTGGTGACCCTTTTGGGCTATTGTGTTGAAAAGAACAAGAGAGTTTTGGTGTATGAGTATATGCCTAACACAAGCTTGCAAGAGTCACTCTTTGGTGATGAGTGTTTTTGTTTGAGTTGGGAGAGAaggttttgcattataatggatgttgctagagcattggagtttttgcaccttggatgtgatccaccagtgattcatggtgatatcaagccaagcaatgtcttgcttgacGCCGAGTTTCGAGGGAAGGTCTCGGACTTTGGCTTGTCAAGGATTAAGGTGGAGGGTGAATTTGGTGTGGACTTGTTTAGCCAGGACTTGGGGAAAAGCCAAGATCTTTGGAAAAGCCAAGACCTTTCAGGTAATTTGACTGCAGCAGAAACTCCTGCAATTGGAACTCCAGTTGAGAGTGTTAGTGAAGTAGATTTTGCTCTTGCTTTGCAAGCTTCTTCTTCATCCAAAAATAGCAGGACTTGTTTTAATGTTAAAGCTTTGAACTTGAACTCTTTGAATTATAATGCTAATATTGTTGGTGAAAGTGTAAATGCAAAGGGTAAGGAAATTTCAAGTTTGGATATAGGAGGAGGAGGAGGGGATGATTGTTGGAATAATAAGTTTGTTCCTTATGATGATGAGTTTTGTAGCACTGATTATAATAGTAAAGAATTGGGCGTTAATGCTTCTTTGGTTGATAATGATGAGAAGGAAAATGGGAAACAATGGGGAAAGGATTGGTGGTGGAGACAAGATGGAAGTGGCGAATTATGTAGTAAAGACTATGTGATGGAATGGATTGGGAGTCAGATTTGTCCATCAAATGCTGATTGGGATGATGGTATTGGTAGTACTAAGAACAACAACATTCAGGAGAAATCAGAGTTGGAAAATTCAAGTCCAATAGATAAAGCCAATGATGCAAATGCACCACAATTATTACAAGTATTATCTGGGATGGAAAATGCAGATAATATTAATAATGGTGTTGATATGAAAGAACTGAAGGGAaagaaaaaccacaacaagaagaagaagaatagaaagatgcaagaGTGGTGGAAAGAAGAACATCTTGCTGAGTTAACCAAGAAGAACAGTAAGCTAAAAAGTCTACAAACTAAATGGAAGAAAGGCTTGAAAGTTCCCCATTTTGATTTAGGTAGAAGATTCTATCTTTGCCAACGTGGTAAGAACTATGGAGAGGAGGGAGAGAATGAGTGTGAACAAAATGGTGAGTTTAGTTTCAGAAGAGGTTGGAGGAAAAAAAGCAGCACACATTCCATTGGAAGTGATATGTGGAGTGGAGATCTTTTCAGCCGTGAACTAAGCAGCACAACTAGCATGAGAGGTACACTGTGTTATGTAGCACCAGAATATGGAGGGTGTGGATTCTTAATGGAGAAAGCTGATATATACAGTTTTGGTGTTTTGATTCTTGTGATTGTGTCAGGTAGAAGACCATTACATGTTCTTGCATCCCCCATGAAGTTAGAGAAAGCTAACTTAATTAGCTGGTGTAGACACTTGGCTCAGTCTGGTAGTAACATTTTAGAACTAGTTGATGATAAATTGAAACAAGATTACAATAAGGAACAAGCTAGCTTGTGTATCAATTTGGCACTCACTTGCTTACAGAAAATTCCAGAGTTGAGACCAGATATTGGTGATATTGTTAAGATTTTGAAGGGGGAGATGGAGCTTCCACCACTTCCATTTGAGTTCTCACCTTCTCCACCTTCTAGATTATACAACAGATCAAGGAGAAAACAGAAGGGCAATGCAGAATAG 2190 0.3648 MPSRQFPSTSSSFFTKPKFLFIALTISASVVIFFSILYFLYHLWHSLVHRAKTIPFDASAPLKLQRFSYKDLKLASNGFDSANVIGKGGSGTVFKGVLKDGKFIAIKRLDSLSLQSEREFQNELQILGGLRSPFLVTLLGYCVEKNKRVLVYEYMPNTSLQESLFGDECFCLSWERRFCIIMDVARALEFLHLGCDPPVIHGDIKPSNVLLDAEFRGKVSDFGLSRIKVEGEFGVDLFSQDLGKSQDLWKSQDLSGNLTAAETPAIGTPVESVSEVDFALALQASSSSKNSRTCFNVKALNLNSLNYNANIVGESVNAKGKEISSLDIGGGGGDDCWNNKFVPYDDEFCSTDYNSKELGVNASLVDNDEKENGKQWGKDWWWRQDGSGELCSKDYVMEWIGSQICPSNADWDDGIGSTKNNNIQEKSELENSSPIDKANDANAPQLLQVLSGMENADNINNGVDMKELKGKKNHNKKKKNRKMQEWWKEEHLAELTKKNSKLKSLQTKWKKGLKVPHFDLGRRFYLCQRGKNYGEEGENECEQNGEFSFRRGWRKKSSTHSIGSDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGFLMEKADIYSFGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAQSGSNILELVDDKLKQDYNKEQASLCINLALTCLQKIPELRPDIGDIVKILKGEMELPPLPFEFSPSPPSRLYNRSRRKQKGNAE 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02913 729 Gene3D Transferase(Phosphotransferase) domain 1 555 701 - -
Car01g02913 729 Gene3D Transferase(Phosphotransferase) domain 1 155 267 - -
Car01g02913 729 MobiDBLite consensus disorder prediction 410 439 - -
Car01g02913 729 Pfam Protein kinase domain 82 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02913 729 MobiDBLite consensus disorder prediction 705 729 - -
Car01g02913 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Car01g02913 729 PANTHER OS08G0275200 PROTEIN 1 728 - -
Car01g02913 729 PANTHER OS07G0586332 PROTEIN 1 728 IPR044576 -
Car01g02913 729 ProSiteProfiles Protein kinase domain profile. 79 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02913 729 SMART serkin_6 79 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02913 729 ProSitePatterns Protein kinases ATP-binding region signature. 85 107 IPR017441 GO:0005524
Car01g02913 729 SUPERFAMILY Protein kinase-like (PK-like) 59 714 IPR011009 -
Car01g02913 729 Coils Coil 488 508 - -
Car01g02913 729 MobiDBLite consensus disorder prediction 413 439 - -
Car01g02913 729 Gene3D Phosphorylase Kinase; domain 1 46 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02913 Car-Chr1 54117073 54119706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02913 562 695 Receptor kinase-like Gene Family AT3G58690 29.710 2.58e-13 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Car01g02913 Pkinase 2.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02913 - - ccaj:109812677 1134.78