Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02905 ATGATGACCAAGTCTTCCACAAAATTAGATGAGTACTCGTCAAGATATGGTTTGGTGGAAGAAGTGAAGCGAGTGAGTGAAGAAAACAAGAAGTTGACAGGAAGGCTAACAGAGATGTGTGAGAATTACAACACATTGATGGAATATATCACAAAGAAAAGGAAATCTCACTCCACCTCTAGTGATGAACATTCATGCATGAAATTACCAATTACTACTGATTTAGAACAAACATCCAATATTCATAAGACTAAAGTTTCAAGACTTTATTTCAAGACACAACCATCTGATTCATCCCTTGTTGTGAAAGATGGATATCAGTGGAGAAAATATGGACAAAAGGTGACAAGGGATAACCCTTCACCAAGAGCATATTTCAAATGCTCCTTTGCTCCAACCTGCACAGTGAAGAAGAAAGTGCAAAGAGCCGTGGATGATCCATCACTTGTTGTTGCAACTTATGAAGGTGAACACAATCATCCTCAAATGGATCCAACCATTAATCATAATTCTAGTAGGAACAAAAACGACTCTTCTTCTTCTTCTAAGAATATCATGATGAAGAATTCCAAAATAGAACAAGTACCTCATAAGTTTTTGGTGGAAGAAATGGCTACTTCATTGACCACGGATCTTAATTTCAGAGCAGCACTAGCAGCTGCTATATCAGGAAAAGTTTTAAATCACAATTAG 693 0.3694 MMTKSSTKLDEYSSRYGLVEEVKRVSEENKKLTGRLTEMCENYNTLMEYITKKRKSHSTSSDEHSCMKLPITTDLEQTSNIHKTKVSRLYFKTQPSDSSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPTCTVKKKVQRAVDDPSLVVATYEGEHNHPQMDPTINHNSSRNKNDSSSSSKNIMMKNSKIEQVPHKFLVEEMATSLTTDLNFRAALAAAISGKVLNHN 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02905 230 MobiDBLite consensus disorder prediction 163 188 - -
Car01g02905 230 Gene3D WRKY domain 86 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car01g02905 230 ProSiteProfiles WRKY domain profile. 97 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car01g02905 230 SMART WRKY_cls 102 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car01g02905 230 SUPERFAMILY WRKY DNA-binding domain 99 162 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car01g02905 230 Pfam WRKY DNA -binding domain 103 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car01g02905 230 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 13 229 IPR044810 GO:0003700
Car01g02905 230 PANTHER WRKY TRANSCRIPTION FACTOR 40-RELATED 13 229 - -
Car01g02905 230 MobiDBLite consensus disorder prediction 157 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02905 Car-Chr1 54065859 54067272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02905 17 230 WRKY Transcription Factor Family AT1G80840 46.739 1.84e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car01g02905 WRKY 3.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02905 - - gmx:732588 225.328