Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02901 ATGGAGCATAGTAATAATGAGGAAATTCCATCAACACCAGCAACACCAGGCACTCCTGGTGTACCTCTTTTTGGTGGGTTTAAGTCAGAGAGAAACGGGAATGGTAGTAATAAGAATAAGAAGTCTCTCCTTAAGAATTGTAAATGCTTCAGTGTCCAAGACTGGACCATAGAAGATGGCGCTCTTCCCACAGTCTCTTGCTCATTAATGCCTCCCCCTCCTGTCCCTCTCGCAAAAAAGATAGGAGCTGAGTTTATAGGGACATTCATTCTGATTTTTGCTGGGACAGCCACTGCTATTGTGAACCAAAAGACAAAAGGGTCGGAGACTCTGATTGGATGTGCTGCTTCTTCTGGTCTTGCCGTTATGATTGTCATCCTCTCCACCGGTCACATCTCTGGTGCTCATCTCAACCCCGCAGTCACCATTTCCTTTGCTGCATTGAAACACTTCCCATGGAAGCATGTGCCTATGTATATTGGCGCACAAGTTTTAGCATCAATATGTGCTGCATTTGCACTCAAAGGGGTATTTCATCCTTTCATGAGTGGTGGAGTCACTGTTCCTTCTGGAGGATATGGCCAAGCTTTTGCTTTAGAGTTCATTATCAGCTTTAATCTCATGTTCGTTGTCACGGCGGTGGCCACCGACACAAGAGCTGTAGGAGAACTGGCAGGAATTGCAGTAGGAGCAACTGTGATGCTTAATATACTCATAGCAGGGCCAATAACAGGAGGATCAATGAACCCAGTAAGAAGTCTTGGTCCAGCTATTGCTGCAAACAACTACAAAGCCATATGGGTCTATctattagctcccataattggcgctctaggtggtgcaggtacttataccgCAGTCAAGCTTCCCCAAGAAGACGATAATGCAAAGGCTAATGCTCCTTCAAACCCCGCCAGCTTCAGAAGATGA 930 0.4323 MEHSNNEEIPSTPATPGTPGVPLFGGFKSERNGNGSNKNKKSLLKNCKCFSVQDWTIEDGALPTVSCSLMPPPPVPLAKKIGAEFIGTFILIFAGTATAIVNQKTKGSETLIGCAASSGLAVMIVILSTGHISGAHLNPAVTISFAALKHFPWKHVPMYIGAQVLASICAAFALKGVFHPFMSGGVTVPSGGYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPITGGSMNPVRSLGPAIAANNYKAIWVYLLAPIIGALGGAGTYTAVKLPQEDDNAKANAPSNPASFRR 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02901 309 ProSitePatterns MIP family signature. 136 144 IPR022357 -
Car01g02901 309 PANTHER AQUAPORIN NIP2-1 3 299 IPR034294 -
Car01g02901 309 MobiDBLite consensus disorder prediction 1 37 - -
Car01g02901 309 TIGRFAM MIP: MIP family channel proteins 83 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car01g02901 309 PRINTS Major intrinsic protein family signature 79 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car01g02901 309 PRINTS Major intrinsic protein family signature 118 142 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car01g02901 309 PRINTS Major intrinsic protein family signature 155 174 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car01g02901 309 PRINTS Major intrinsic protein family signature 199 217 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car01g02901 309 PRINTS Major intrinsic protein family signature 230 252 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car01g02901 309 PRINTS Major intrinsic protein family signature 267 287 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car01g02901 309 CDD MIP 79 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car01g02901 309 Pfam Major intrinsic protein 77 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car01g02901 309 PANTHER BNAA02G36290D PROTEIN 3 299 - -
Car01g02901 309 SUPERFAMILY Aquaporin-like 76 294 IPR023271 -
Car01g02901 309 Gene3D Glycerol uptake facilitator protein. 72 300 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02901 Car-Chr1 54022066 54025261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02901 5 309 Major Intrinsic Protein MIP AT1G80760 77.419 9.45e-169 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02901 K09874 - gmx:100815637 494.582