Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02882 ATGGGGAAGCTGGTTCTGAAAGTTGGAAGCAGACCACCATGGGTGGGTCTAGCTGCTGCAGTTTGGATCCAAATAGCTGCTGGAAATGCTTACAACTTCCCTCTATATTCTTCTGCTCTCAAATCTGTGTTGGGTCTGAATCAACAACAGGTAACTATTCTTGGAGTGGCCAATGATGTTGGAGAGAATTTGAGTTTGCTTCCTGGTATTGTCTGCAACCAGTTCCCTCCTTGGGCTCTGCTTCTTGTTGGTTCTGTCCTCTGTTTTTTGGGTTATGGACTTATCTGGCTTGCTGTTACCCAAACTGTTTCCAACATGCCCTATGTGCTGCTATGGCTAGCACTTTGTGTCGCCGCAAACAGCAGCGCATGGTTCGGCACAGCCGTGCTGGTTACCAACATGAGAAATTTTCCTCTCAGTAGAGGCACCATCTCAGGCATTCTTAAAGGTTATGTAGGGATCAGTGCTTCAGTATACACATTAATATATAGCATACTACTGAAAAGTTCTGCTTCTGAGTTACTTTTGTTTCTATCAATTGGAGTTTCTATTGTGTGCTTAATTATGATGTATTTCATTAAGCCTTGTACTCCTCCTTCTGGTGAAGACACTTCAGTTCATGTTCATTTTATTTTCACACAAGCTTCAAGTATTTTACTTGCCACGTATCTTGTTTTAACCACGATATTAAGCGACATGGTTTTGATTAATGATGCTGTTTCATACATCATAGTTGTCATAATGATTATACTTATGATGACTCCACTTGCAATTCCTTTGAAAATGACTCTATTTCCTGCCACTCAAAAAAACAATGTTCTATTGGACGGTTCCTCTGATGTTGCAACACAAACAAGTCCATTGATCACGTCACCATCATCATCTTCTTCAGCTGCATATCTTGGAAGTTTTCATGAAAATGAGGATGTTTCTTCAGATGTTGAGATACTAATTGCTGAAGGGGAAGGGGCAGTGAGGAAGAAAAGGAGACCAAAAAGAGGAGATGATTTTAAGTTCAAAGAAGCATTAGTCAAGGCTGATTTCTGGTTACTTTGGTTTGCTTATTCTTTAGGGGTTGGTTCAGGAGTAACTGTTCTAAATAATTTGGCTCAAATTGGAGTTGCATTAGGTGTTGAAGATGCAACCATATTGCTTGCAGTGTTCAGCTTTTGCAATTTTATGGGTCGTCTAGGTGCTGGTGCTGTCTCTGAACACTTTGTTAGGTTGATAACACTACCTAGAACATTTTGGATGACATGTACACAAGTAATTATGATCATAGCTTTTTTGCTTTATGCTTCAGCTCTAGATGGAACTCTTTATGCTGCAACAGCTTTACTTGGGATGTGCTATGGAGTTCAATACTCTATAATGGTTCCAACTGTTTCTGAACTTTTTGGTTTGAAGCACTTTGGTGTAATTAGTAGCTTTATGATGCTAGGAAATCCAATTGGTGCCCTTCTTTTTTCTGTTTTTTTTGCTGGAAATGTTTATGATACAGAAGCTGCAAAGCAAGGTAACTCCACATGCTATGGTGCAGATTGCTTCAGAATCACTTTTTTAGTTTTGGCTGGTGTCTGTGGACTTGGTACCATTTTGAGTATAATTTTGACAGTTAGAATAAGACCAGTATATCAAATGCTATATGCTGGCGGTTCGTTTCGCCTGTCGCATACTTCAAATCAATGA 1689 0.3967 MGKLVLKVGSRPPWVGLAAAVWIQIAAGNAYNFPLYSSALKSVLGLNQQQVTILGVANDVGENLSLLPGIVCNQFPPWALLLVGSVLCFLGYGLIWLAVTQTVSNMPYVLLWLALCVAANSSAWFGTAVLVTNMRNFPLSRGTISGILKGYVGISASVYTLIYSILLKSSASELLLFLSIGVSIVCLIMMYFIKPCTPPSGEDTSVHVHFIFTQASSILLATYLVLTTILSDMVLINDAVSYIIVVIMIILMMTPLAIPLKMTLFPATQKNNVLLDGSSDVATQTSPLITSPSSSSSAAYLGSFHENEDVSSDVEILIAEGEGAVRKKRRPKRGDDFKFKEALVKADFWLLWFAYSLGVGSGVTVLNNLAQIGVALGVEDATILLAVFSFCNFMGRLGAGAVSEHFVRLITLPRTFWMTCTQVIMIIAFLLYASALDGTLYAATALLGMCYGVQYSIMVPTVSELFGLKHFGVISSFMMLGNPIGALLFSVFFAGNVYDTEAAKQGNSTCYGADCFRITFLVLAGVCGLGTILSIILTVRIRPVYQMLYAGGSFRLSHTSNQ 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02882 562 SUPERFAMILY MFS general substrate transporter 242 543 IPR036259 -
Car01g02882 562 CDD MFS_Mch1p_like 12 531 - -
Car01g02882 562 Pfam Nodulin-like 13 260 IPR010658 -
Car01g02882 562 Gene3D MFS general substrate transporter like domains 305 548 IPR036259 -
Car01g02882 562 SUPERFAMILY MFS general substrate transporter 8 198 IPR036259 -
Car01g02882 562 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 561 - -
Car01g02882 562 Gene3D MFS general substrate transporter like domains 2 204 IPR036259 -
Car01g02882 562 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02882 Car-Chr1 53898746 53902030 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02882 1 561 Nodulin-like Gene Family AT1G80530 59.187 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02882 - - adu:107459780 828.935