Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02880 ATGTCTCATCGGAATGATGCTAATTATACTTCAATACCTGTTAGCTCCTCATATATAGAATTGCAGCCACAAAATGATTCACCAAACTCTTTTCAAAGGTTATCTTTTGATGAGGGTGGGGGTTTTTTAGGATCTAAGGTtgatggtaatgataattatgatgatgattttgaaattgatattgataattatCCTCTTGTTGTTGGACCTAATCCTAATAATGGTTCTGGGGTACCTGGTGCTGTTTTCAATTTGACTACTACTATTATTGGGGCTGGGATTATGGCTCTTCCTGCCACCATGAAAGTTCTTGGTGTAGTTTTAGGGATTGTATTGATTATTCTAATGGGGATTTTGTCGGAGATTAGTGTCGAATTGTTGGTTCGATTTTCGGTTATGTGTAAAGCAACCTCTTATGGTGAGGTTGTTGAACATGCTATGGGAAGGCCTGCTAGGATTTTGTCTGAGATTTGTATTATCATGAATAATGCTGGTGTTTTGGTGGTTTATTTGATAATAATGGGGGATGTTATGTCCGGTTCCGCTCATCATTTAGGGGTTTTCGATCAGTTAATGGGGAATGGTGTTTGGGATCAGAGGAAGCTTGTGATTCTTGTTGTGATGGTGGTGTTTTTGGTGCCTCTTTGTTCGCTTGATAAGATTGATTCGTTGAGCTTAACTTCAGCTGCCTCAGTCGCTCTTGCGATCATGTTTGTCGTTGTTGCTTTTACCGTTGCTTTCATTAAGCTTGTTGAAGGAAAGATTGACGCTCCGCGGATGGTTCCGGATTTAAGCTCGAAAAAGGCCATCTTGGATTTGCTTGTGGTGATTCCAATTATGACAAATGCATATGTTTGCCATTTTAATGTGCAGCCGATATACAATGAGCTCGAAGGTAGGTCTCCTCAGAAGATGAACCGAGTAGGAAGAGTCACCACAATTTTGTGCATCTTGGTTTATTCTGCAACAGCGCTGTCTGGTTACCTATTATTCGGGGAAGATACTGAGTCTGATGTCCTGACTAATTTTGATAAGGATCTCGGAATCCGGTTTAGTTCGGCCTTGAACTATATTGTTAGAGTTGGCTACATTCTCCATTTGATACTTGTATTTCCTGTTATTCATTTTTCGCTGCGCCAAACGGTGGATACCTTGGTGTTTGAAGGGTCACCTCCTTTATCAGAAAGTAGGAAGAGATCACTTGGGCTGACTGTGGTTCTGTTGGTCTTCATATATATTGGTTGTACCATGATTCCTAACATTTGGACGGCTTTTAAGTTCACTGGCGCAACGACGGCTGTTTCGTTGGGTTTCATATTTCCATCTCTTGTTGCAATAAGATTAAGTCATAAGGGTGACTTGAGCCATGTGGAATGGATTTTGTCGTGGTTAATGTTGATATTGGCAGTGACTGTTAGCATCGTAGGAGTCATTGGTAATGTGTATAGCATGGAGAGTAAGTCTTAG 1467 0.3974 MSHRNDANYTSIPVSSSYIELQPQNDSPNSFQRLSFDEGGGFLGSKVDGNDNYDDDFEIDIDNYPLVVGPNPNNGSGVPGAVFNLTTTIIGAGIMALPATMKVLGVVLGIVLIILMGILSEISVELLVRFSVMCKATSYGEVVEHAMGRPARILSEICIIMNNAGVLVVYLIIMGDVMSGSAHHLGVFDQLMGNGVWDQRKLVILVVMVVFLVPLCSLDKIDSLSLTSAASVALAIMFVVVAFTVAFIKLVEGKIDAPRMVPDLSSKKAILDLLVVIPIMTNAYVCHFNVQPIYNELEGRSPQKMNRVGRVTTILCILVYSATALSGYLLFGEDTESDVLTNFDKDLGIRFSSALNYIVRVGYILHLILVFPVIHFSLRQTVDTLVFEGSPPLSESRKRSLGLTVVLLVFIYIGCTMIPNIWTAFKFTGATTAVSLGFIFPSLVAIRLSHKGDLSHVEWILSWLMLILAVTVSIVGVIGNVYSMESKS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02880 488 Pfam Transmembrane amino acid transporter protein 76 479 IPR013057 -
Car01g02880 488 PANTHER BNAC06G40470D PROTEIN 51 487 - -
Car01g02880 488 PANTHER AMINO ACID TRANSPORTER 51 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02880 Car-Chr1 53885939 53888080 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02880 6 488 Amino Acid or Auxin Permease AAAP Family AT1G80510 71.111 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02880 - - gmx:100791860 785.408