Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car01g02871 | ATGGCAGTTATATCCCTCTCTCTACTCTCACCCCCTTCCACTCATTCTTGTTTCTATACACGAATCAATTTCCGCTCCCACAACAGTAACAACAATTTCCTTTCGATtcattccccttctccttttccttctactttctccaactccAATTCAAAGGTTTCTAGTAGAACAAAACGCTTTCACACTGTTTTTGCTGCTTCTTCTGACTATTATTCTACTCTCGGAGTTCCCAAATCCGCCACCGCTAAAGAAATCAAAGCCGCTTATCGAAGGTTAGCTCGTCAGTACCATCCTGATGTGAACAAGGAACCTGGGGCAACTGAAAAGTTCAAAGAGATCAGTGCTGCATATGAGGTGCTATCAGATGACAAAAAGAGGGCTTTGTATGATCAATATGGAGAAGCAGGAGTTAAGAGTGCAGTGGGAGGAGGATCAAGTGCCTATACGACCAATCCATTCGACTTATTTGAGACATTTTTTGGGCCAAATATGGGTGGCTTTGCTGGTATGGACCCAACTGGATTTGGCACACGGCGTCGTAGTACTGTTACTAAGGGTGAAGACATCCGGTATGATTTCTCCTTGGAGTTTTCTGAGGCAATTTTTGGAACAGAGAAAGAGTTCGAGCTTTTCCATTTAGAAACATGTGAAGTCTGTACTGGTACTGGTGCAAAGTTAGGCTCCAAGATGAGAGTATGTTCAACTTGTGGTGGGAGGGGTCAGGTGATGAGGACCGAACAAACACCTTTTGGATTGTTCTCACAGGTTTCAGTATGTCCAAGCTGTGGAGGTGATGGTGAAGTCATATCTGAATATTGTCGTAAATGCAGTGGTGAAGGACGCATACGGGTTAAGAAAAGTATGAAAGTTAAAGTTCCTCCTGGGGTTAGCTCGGGCAGTATTTTAAGAGTTGCTGGGGAGGGTGATGCTGGACCAAGAGGGGGTCCTCCAGGAGATCTTTACGTTTATCTCGATGTGCAAGAGATACCAGGAATTCAAAGAGACGACATTAATCTCCGCTCAACAATATCAGTCAGTTATCTAGATGCTATACTGGGGTCTGTAGTGAAGGTTAAGACAGTTGAAGGAACTTCTGAACTACAAATCCCTTCCGGCACCCAACCTGGAGATATCCTCGTCCTTGCAAGGAAAGGTGTACCAAAATTAAACAAGCCATCAATACGTGGTGACCACCTATTTACTGTTAAAGTTACAATACCGAAACGTATTAGTTCAAAGGAGCGTGAGGTACTTGAAGAACTTGCTTCTCTAGGTGACACAAGCAGTCATTCCAGATCCCGTCCTAGAACTCAATCTTCCACAGGAAGTAAGGAAGGTCCTGCAGCTCAAAGGGCCGAAAGTCCAATAGCAACAGTCACAGAAAAACCAGAGAAATCAGAAGACCAAGATGACTTATGGAATAAACTAAAGAATGCGGCTGGGTCTGTGGCAAATGGAGCTCTAAAGTGGTTTAAAGATAATCTTTAG | 1488 | 0.4261 | MAVISLSLLSPPSTHSCFYTRINFRSHNSNNNFLSIHSPSPFPSTFSNSNSKVSSRTKRFHTVFAASSDYYSTLGVPKSATAKEIKAAYRRLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRALYDQYGEAGVKSAVGGGSSAYTTNPFDLFETFFGPNMGGFAGMDPTGFGTRRRSTVTKGEDIRYDFSLEFSEAIFGTEKEFELFHLETCEVCTGTGAKLGSKMRVCSTCGGRGQVMRTEQTPFGLFSQVSVCPSCGGDGEVISEYCRKCSGEGRIRVKKSMKVKVPPGVSSGSILRVAGEGDAGPRGGPPGDLYVYLDVQEIPGIQRDDINLRSTISVSYLDAILGSVVKVKTVEGTSELQIPSGTQPGDILVLARKGVPKLNKPSIRGDHLFTVKVTIPKRISSKEREVLEELASLGDTSSHSRSRPRTQSSTGSKEGPAAQRAESPIATVTEKPEKSEDQDDLWNKLKNAAGSVANGALKWFKDNL | 495 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car01g02871 | 495 | CDD | DnaJ_C | 187 | 410 | - | - | |
Car01g02871 | 495 | MobiDBLite | consensus disorder prediction | 421 | 473 | - | - | |
Car01g02871 | 495 | Hamap | Chaperone protein DnaJ [dnaJ]. | 66 | 479 | IPR012724 | GO:0005524|GO:0006457|GO:0009408|GO:0051082 | |
Car01g02871 | 495 | MobiDBLite | consensus disorder prediction | 424 | 447 | - | - | |
Car01g02871 | 495 | ProSitePatterns | Nt-dnaJ domain signature. | 110 | 129 | IPR018253 | - | |
Car01g02871 | 495 | Gene3D | - | 186 | 322 | - | - | |
Car01g02871 | 495 | Gene3D | DnaJ domain | 65 | 171 | IPR036869 | - | |
Car01g02871 | 495 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 333 | 418 | IPR008971 | GO:0006457|GO:0051082 | |
Car01g02871 | 495 | TIGRFAM | DnaJ_bact: chaperone protein DnaJ | 69 | 423 | IPR012724 | GO:0005524|GO:0006457|GO:0009408|GO:0051082 | |
Car01g02871 | 495 | Pfam | DnaJ central domain | 216 | 280 | IPR001305 | GO:0031072|GO:0051082 | |
Car01g02871 | 495 | PRINTS | DnaJ domain signature | 71 | 89 | IPR001623 | - | |
Car01g02871 | 495 | PRINTS | DnaJ domain signature | 89 | 104 | IPR001623 | - | |
Car01g02871 | 495 | PRINTS | DnaJ domain signature | 105 | 125 | IPR001623 | - | |
Car01g02871 | 495 | PRINTS | DnaJ domain signature | 125 | 144 | IPR001623 | - | |
Car01g02871 | 495 | MobiDBLite | consensus disorder prediction | 458 | 473 | - | - | |
Car01g02871 | 495 | Gene3D | - | 216 | 280 | - | - | |
Car01g02871 | 495 | SUPERFAMILY | Chaperone J-domain | 65 | 175 | IPR036869 | - | |
Car01g02871 | 495 | PANTHER | DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED | 59 | 437 | - | - | |
Car01g02871 | 495 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 184 | 335 | IPR008971 | GO:0006457|GO:0051082 | |
Car01g02871 | 495 | CDD | DnaJ | 69 | 122 | IPR001623 | - | |
Car01g02871 | 495 | Pfam | DnaJ domain | 69 | 130 | IPR001623 | - | |
Car01g02871 | 495 | SMART | dnaj_3 | 68 | 125 | IPR001623 | - | |
Car01g02871 | 495 | CDD | DnaJ_zf | 216 | 280 | IPR001305 | GO:0031072|GO:0051082 | |
Car01g02871 | 495 | Gene3D | - | 332 | 424 | - | - | |
Car01g02871 | 495 | PANTHER | MOLECULAR CHAPERONE HSP40/DNAJ FAMILY PROTEIN | 59 | 437 | - | - | |
Car01g02871 | 495 | ProSiteProfiles | Zinc finger CR-type profile. | 203 | 285 | IPR001305 | GO:0031072|GO:0051082 | |
Car01g02871 | 495 | SUPERFAMILY | DnaJ/Hsp40 cysteine-rich domain | 203 | 283 | IPR036410 | - | |
Car01g02871 | 495 | ProSiteProfiles | dnaJ domain profile. | 69 | 133 | IPR001623 | - | |
Car01g02871 | 495 | Pfam | DnaJ C terminal domain | 189 | 407 | IPR002939 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car01g02871 | Car-Chr1 | 53830911 | 53837384 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car01g02871 | 70 | 176 | C2H2 Transcription Factor Family | AT1G74250 | 37.719 | 1.34e-10 | 62.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car01g02871 | K03686 | - | gmx:100798567 | 800.816 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Car01g02871 | 01 | 53830911 | 53837384 | Car01g02871 | 01 | 53830911 | 53837384 | ECH |