Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02821 ATGTGCCTAATTCTTCGTACATTTTCTGCCACGCTCTCAACAACATTTTCGCTAGAAATGGAGAGCCTGAAATCACCTTTCAAGGGTATTGTAAACGATTTTAGAAGAAGAGCGTTACACTATAAAGATGATTGGATTTCTGGTCTTACTTCAGGAACCGGGATATTGGCCCCAACTACATATATTTTCTTTGCTTCTGCTTTACCTGTTATTGCTTTCGGCGCACAGCTCAGTCGGGACACTGATGGAAGCTTGAGCACTGTGGAAACACTTGCTTCAACGGCCATTTGTGGAATCATACACTCCATTTTTGGTGGACAGCCTCTACTAGTACTAGGAGTGGCAGAACCTACTATCCTTATGTACACCTATTTGTATAATTTTGCTAAAAATAGAGAAGGATTGGGAAGAGAACTCTTTTTGGCTTGGGCAGGATGGGTTTGTGTATGGACTGCTCTTTTGTTGTTTCTTCTAGCAATATTCAATGCTGGCAATATCATCAATAGATTTACAAGGATTGCTGGTGAGCTTTTTGGCATGTTGATTAGTGTCTTATTCCTTCAAGAGGCTATCAAGGGAATGATAAATGAGTTTAAAGTTCCTAAAGAAGTGGATCCAACATTGGATAAATACCAATTTCATTGGCTATATGCAAATGGATTGCTTGGTATTATATTCACCTTTGGACTTCTCTATACTTCTTTAAAAAGCAGAAGAGCAAGGTCATGGTTATATGGAACAGGATGGTTAAGAAGTTTCACTGCAGACTATGGAGTTCCTCTCATGGTGGTGGTGTGGACAGTTTTATCATTCATAGTAGTATCAAATAAAGTACCTTCTGGAGTTCCTAGAAGACTCATTGCACCTTTGGCTTGGGAATCTGCATCATTACATCACTGGACAGTTATCAAAGATATGGGGAAGGTTTCTCCAGCACATATTTTTGCTGCTTTTGTTCCTGCTTTAATGATAGCAGGACTTTACTTTTTTGACCATAGTGTTGCATCTCAGTTGGCACAGCAAAAGGAATTCAATCTTAGGAAACCTTCTGCATATCACTATGACATATTGTTGCTAGGATTCATGACTTTGTTTTGTGGACTAGTTGGCTTGCCCCCTTCAAATGGGGTTCTGCCTCAATCCCCTATGCACACCAAGAGTCTGGCTGTTCTCAAGAGACAGTTGATCCGAAGAAAGATGGTTAAAAGTGCCAAGGAAAGCATAAGGAAGAACGCTAGCAACTCTGAAATATATGGGAAGATGCAAGCAGTGTTTATAGAAATGGATAATAATATTCCTGATGTGCAGAACAATTCAGTGGTGAAAGAACTAGAAGATTTGAAGGAGTTTGTCCTAAATGGTGAAGATAAAGGAGACAACAATAAGAGCACATTTGATCCTGAGAAACACATTGATACATATTTGCCTGTGAGAGTAAAGGAGCAAAGAGTGAGCAACCTTTTACAATCACTCTTTGTAGGAGCAGCAGTGTTTGCTATGCCTGCCATAAAAATGATACCAACTTCAGTTCTGTGGGGTTACTTTGCTTACATGGCTATTGATAGTCTTCCAGGGAATCAATTCTGGGAAAGGATACTGCTTCTTTTTGTAAAACCTAGTAGGTGGTACAAGTTGTTGGAAGGTGATCATGCTTCCTTTGTTGAGTCAGTACCTTTCAGATATATATTCTTCTTTACACTCTTCCAATGTGTGTACTTTTTGGTTTGTTTTGGAGTGACATGGATTCCTATTGCTGGAATGTTGTTCCCTTTGCCTTTCTTTTTGCTTATCTCATTGAGGCAACATATACTACCCAAGCTGTTCAATCCGCACCATCTTATGGAACTAGATGCAGCTGAATATGAAGAAATACCTGGTGCTCCAAAACTAAGTTTCAATTTGTCCTTCAAAGAAGTTGAATCACCAAGAGTTGGATCAAAGGAAATAGGCAATGCTGAAATATTAGATGAGTTAACAACTAACAGAGGGGAGTTGAAGGTGAGAACAATTAGCTTCAGTGAGGAAAGAAATAACCAGCAGGTTTATCCTCATGTAATGGATCCACAGTCACAGAATGTAGGGGAAAGGTGA 2091 0.395 MCLILRTFSATLSTTFSLEMESLKSPFKGIVNDFRRRALHYKDDWISGLTSGTGILAPTTYIFFASALPVIAFGAQLSRDTDGSLSTVETLASTAICGIIHSIFGGQPLLVLGVAEPTILMYTYLYNFAKNREGLGRELFLAWAGWVCVWTALLLFLLAIFNAGNIINRFTRIAGELFGMLISVLFLQEAIKGMINEFKVPKEVDPTLDKYQFHWLYANGLLGIIFTFGLLYTSLKSRRARSWLYGTGWLRSFTADYGVPLMVVVWTVLSFIVVSNKVPSGVPRRLIAPLAWESASLHHWTVIKDMGKVSPAHIFAAFVPALMIAGLYFFDHSVASQLAQQKEFNLRKPSAYHYDILLLGFMTLFCGLVGLPPSNGVLPQSPMHTKSLAVLKRQLIRRKMVKSAKESIRKNASNSEIYGKMQAVFIEMDNNIPDVQNNSVVKELEDLKEFVLNGEDKGDNNKSTFDPEKHIDTYLPVRVKEQRVSNLLQSLFVGAAVFAMPAIKMIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVKPSRWYKLLEGDHASFVESVPFRYIFFFTLFQCVYFLVCFGVTWIPIAGMLFPLPFFLLISLRQHILPKLFNPHHLMELDAAEYEEIPGAPKLSFNLSFKEVESPRVGSKEIGNAEILDELTTNRGELKVRTISFSEERNNQQVYPHVMDPQSQNVGER 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02821 696 Gene3D Helical hairpin bin 37 79 - -
Car01g02821 696 Pfam HCO3- transporter family 477 567 IPR011531 GO:0006820|GO:0016021
Car01g02821 696 Pfam HCO3- transporter family 219 393 IPR011531 GO:0006820|GO:0016021
Car01g02821 696 Pfam HCO3- transporter family 26 199 IPR011531 GO:0006820|GO:0016021
Car01g02821 696 PANTHER BORON TRANSPORTER 4-RELATED 20 684 - -
Car01g02821 696 PANTHER ANION EXCHANGE PROTEIN 20 684 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02821 Car-Chr1 53468326 53474414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02821 20 683 Antiporters AT1G74810 70.270 0.0 967
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02821 K24194 - gmx:100811184 1152.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02821 01 53468326 53474414 Car01g02821 01 53468326 53474414 ECH