Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02809 ATGAAGAAAGCAAAGAATATCAGTTTGAAAGCTGAAAAGGTCCCGGTTCGATTAACTCGTGCACGGGCTGCGGCTTTAAGTGCAACTGAACAGTTGCCACCATTGAAGGATGTACCGCACGAAAGTCAAAAGCAGCCACTAGGAAACAATTCAAAAAGAGCAGTTTCGGATGATACATGTCTTCCGCGTAAGAAAAGAGCTGTTTTTGGGGATGTCACTAACATTCGAGGCGAAAATTCAAAGAGGAGCTGTTTAAATCCAACTACAATTCAGGCTAAGAAAAGGAAGCTAATTAACCCTGCTCAAGTCAATATTTCGATCAAGGTTCCGTCAGTTTCTCTGGAGCTACCACAATTTCAAACTGGCTCAAAAGCTGAGATAGTTAGCCAGTCATCTGGAATATCTGCTCATTCTTTGATTTCTAATAATAAAGCAGCTTCGCAAACTGTTACAGCCAAGAAAGGTACTGTTTCTGAACTTCTGAACGCGTCAAAGGATCCAGATGTTCCTAATATAGATGCTGATATTGAAGATCCTCAACTATGCAGCCACTATGCCGCTGCTATATATGACAACTTGCGTGTTGCTGAGCTGTCGAGAAGGCTTCCTCCTAACTTCATGGAAACAGTACAGCAAGATATAACTTCAAGCATGCGCGGGATACTGATTGATTGGCTTGTAGAGGTTTCTGAGGAGTACAATTTGCTAGCAGACACTCTTTACCTTACCGTGTATCTCATAGATTGGTTTCTCTCCAAAAATTACATTGAAAGACAGAAACTTCAGCTGCTCGGCATCACTTGCATGCTAATTGCCTCGAAGTACGAAGAAATTCATGGCCCGCGTATTGAAGACTTCTGCTTCATCACAGACAACACATACACAAAAGAGGAGGTACTAAAAATGGAAATTCAAGTGTTGAAGTCCTCTTCATATCAACTGTTTGCTCCCACTACGAAAATTTTTCTCAGGAGGTTTCTTAGAGCGGCACAAGCTTCATACGAGAGACCTAACATTGAGTTGGAGTACTTGGCCAATTACCTTGCTGAACTAACATTGATGAGCTATGGTTTCTTAAATTTCCTTCCTTCGATGATTGCTGCATCTGCAGTGTTTCTCGCGAGATGGACATTAGATCAGTCAAGTCACCCATGGAATTCAACTCTTGAACACTATGCCGCTTACAAAGCATCGGATTTGAAAGCAACAGTTGTTACTTTACAGGATCTACAGCTGAATAGCAATGATTGCCCTTTAACCGCGATTCGCACCAAGTACACACAAGACAAGTTCAAATGTGTAGCAGCTTTGTCTTCACCAAAAGTGCTTGAAACAATGTTCTGA 1344 0.4174 MKKAKNISLKAEKVPVRLTRARAAALSATEQLPPLKDVPHESQKQPLGNNSKRAVSDDTCLPRKKRAVFGDVTNIRGENSKRSCLNPTTIQAKKRKLINPAQVNISIKVPSVSLELPQFQTGSKAEIVSQSSGISAHSLISNNKAASQTVTAKKGTVSELLNASKDPDVPNIDADIEDPQLCSHYAAAIYDNLRVAELSRRLPPNFMETVQQDITSSMRGILIDWLVEVSEEYNLLADTLYLTVYLIDWFLSKNYIERQKLQLLGITCMLIASKYEEIHGPRIEDFCFITDNTYTKEEVLKMEIQVLKSSSYQLFAPTTKIFLRRFLRAAQASYERPNIELEYLANYLAELTLMSYGFLNFLPSMIAASAVFLARWTLDQSSHPWNSTLEHYAAYKASDLKATVVTLQDLQLNSNDCPLTAIRTKYTQDKFKCVAALSSPKVLETMF 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02809 447 SUPERFAMILY Cyclin-like 177 311 IPR036915 -
Car01g02809 447 Pfam Cyclin, N-terminal domain 189 309 IPR006671 -
Car01g02809 447 SMART cyclin_7 224 308 IPR013763 -
Car01g02809 447 SMART cyclin_7 321 409 IPR013763 -
Car01g02809 447 Gene3D - 202 315 - -
Car01g02809 447 CDD CYCLIN 317 395 IPR013763 -
Car01g02809 447 PANTHER CYCLIN-A2-4 45 447 - -
Car01g02809 447 PIRSF Cyclin_A_B_D_E 1 446 IPR039361 -
Car01g02809 447 Pfam Cyclin, C-terminal domain 317 439 IPR004367 -
Car01g02809 447 Gene3D - 189 436 - -
Car01g02809 447 PANTHER CYCLINS 45 447 IPR039361 -
Car01g02809 447 SUPERFAMILY Cyclin-like 317 442 IPR036915 -
Car01g02809 447 CDD CYCLIN 218 307 IPR013763 -
Car01g02809 447 MobiDBLite consensus disorder prediction 25 58 - -
Car01g02809 447 SMART Cyclin_C_2 317 440 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02809 Car-Chr1 53356590 53361535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02809 4 447 Core Cell Cycle Gene Families AT1G80370 53.233 2.74e-159 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02809 K06627 - mtr:MTR_2g102550 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02809 01 53356590 53361535 Car01g02809 01 53356590 53361535 ECH