Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02799 ATGGGTATGAATTGCAATAGAGTAGAGCACTTCGAAGAAATAACAATGAGAACTCAAACTGAGATTCCAATTCATCAAGTTCGTTTACCACCAGAGAGAACATTACTCAACAAACTTAAACAAAGACTCTCTGAAATATTCTTCCCTGATGATCCTTTACACCGTTTCAAAAATCAACCTTCTTTCAAAAAGTTTCTTCTTACCCTTCAATATTTCTTCCCAATTTTTGAATGGGGTTCTCAATATAATCTTAAACTTCTTCGTTCTGATCTCATTTCTGGTCTCACCATTGCTAGCCTCGCCATTCCTCAGGGAATAAGCTATGCGAAGCTTGCAAATTTACCACCTATTATTGGATTGTATTCAAGTTTTGTGCCTCCATTGATATACTCTATGCTTGGAAGTTCTAGACATCTTGGTGTTGGACCTGTTTCAATTGCATCTTTAGTTATGGGATCAATGTTGAGTGAGACTGTTACTTACGCTCAAAATCCTACTCTTTATCTTCAATTGGCTTTCACTGCTACTTTCTTTGCTGGTTTATTCCAAGCTTCTCTTGGTATATTAAGATTAGGATTCATAATTGATTTTCTATCCAAAGCAACGTTGGTGGGTTTCATGGCCGGTGCTGCTATCATTGTGTCACTACAACAACTCAAAGGGTTACTTGGAATTGTGCACTTTACTAACAAGATGCAAATTCTTCCTGTATTGATATCTGTTTACAACCATAAGGACGAGGTACAAAGCTCCAAATTTTTAAGTTCGAAGAAACCAAAACTATTCTGGGTTTCAGCTGCTGCACCTTTAACATCAGTCATTCTGTCAACCCTTTTAGTCTTTCTTCTCAGAAATAAGACTCAACACATTTCAATTATTGGGAAGTTACCAAAGGGTCTTAATCCACCATCAGTAAACTTGTTATACTTCAATGGTTCTTACTTGGCTCTTGCTATCAAAACAGGCATTGTCACAGGGATCCTATCTCTCACAGAAGGAATTGCAGTAGGTAGAACATTTGCAGCACTTAAGAACTACCAAGTGGATGGAAACAAAGAAATGATGGCTATTGGTATTATGAACTTAGCTGGCTCTTGCAGTTCATGCTTTGTCACATCAGGATCGTTTTCTCGTTCAGCGGTTAACTACAATGCTGGAGCACAGACAGCAGTTTCTAATATAGTCATGGCTTCAGCTGTTTTAGTGACCCTTTTGTTTCTCATGCCTCTCTTCTATTATACACCGAACCTTGTCTTAGCAGCCATCATCATTGCGGCTGTGGTTGGACTAATTGATTTTCAAGCTGCATATAAACTATGGAAGGTTGACAAACTTGATTTCTTGGCCTGCATGTGCTCCTTTTTTGGTGTTCTCTTCATTTCTGTTCCTTTAGGCCTCAGTATCGCGGTTGCCATATCAGTCTTCAAGATCCTACTTCATGTCTCTAGACCAAACACTATGGTTTTGGGGAATATACCAGGAACACAAATATTCCATAACATAAATCAATACAAAGAAGCTTTAAGAATACCTTCGTTTCTCGTTTTGGCTGTTGAGTCTCCAATCTATTTTGCTAATTCGACTTACCTTCGAGAGAGGATACTGAGATGGGTTCGAGAAGAGGAAGAACAAATAAAAGCACATAATGGAAAATCATTGGAGTGCATAATTTTAGATATGACAGCTGTCACAGCAATAGACACAAGTGGTCTTGAAACTTTAGGTGAACTTAGAAAGATGCTGGAACAGAGATCACTGAAGCTTGTGTTGGTAAATCCTGTTGGAAATGTGATGGAAAAGTTACATACGTCGAAAATTTTGGATACATTTGGATTTAAAGGAGTCTACCTCACAGTCGGAGAAGCTGTGGCTGGCATTTCATCATTAGAGAAAGCTCAACCTTGA 1905 0.3843 MGMNCNRVEHFEEITMRTQTEIPIHQVRLPPERTLLNKLKQRLSEIFFPDDPLHRFKNQPSFKKFLLTLQYFFPIFEWGSQYNLKLLRSDLISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSMLGSSRHLGVGPVSIASLVMGSMLSETVTYAQNPTLYLQLAFTATFFAGLFQASLGILRLGFIIDFLSKATLVGFMAGAAIIVSLQQLKGLLGIVHFTNKMQILPVLISVYNHKDEVQSSKFLSSKKPKLFWVSAAAPLTSVILSTLLVFLLRNKTQHISIIGKLPKGLNPPSVNLLYFNGSYLALAIKTGIVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGIMNLAGSCSSCFVTSGSFSRSAVNYNAGAQTAVSNIVMASAVLVTLLFLMPLFYYTPNLVLAAIIIAAVVGLIDFQAAYKLWKVDKLDFLACMCSFFGVLFISVPLGLSIAVAISVFKILLHVSRPNTMVLGNIPGTQIFHNINQYKEALRIPSFLVLAVESPIYFANSTYLRERILRWVREEEEQIKAHNGKSLECIILDMTAVTAIDTSGLETLGELRKMLEQRSLKLVLVNPVGNVMEKLHTSKILDTFGFKGVYLTVGEAVAGISSLEKAQP 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02799 634 CDD STAS_SulP_like_sulfate_transporter 504 619 - -
Car01g02799 634 ProSitePatterns SLC26A transporters signature. 116 137 IPR018045 GO:0008271|GO:0008272
Car01g02799 634 PANTHER SLC26A/SULP TRANSPORTER-RELATED 18 634 - -
Car01g02799 634 Pfam Sulfate permease family 87 452 IPR011547 GO:0016021
Car01g02799 634 Gene3D STAS domain 483 628 IPR036513 -
Car01g02799 634 ProSiteProfiles STAS domain profile. 503 626 IPR002645 -
Car01g02799 634 ProSiteProfiles Caspase family p10 domain profile. 35 74 IPR002138 GO:0004197|GO:0006508
Car01g02799 634 SUPERFAMILY SpoIIaa-like 509 624 IPR036513 -
Car01g02799 634 Pfam STAS domain 504 622 IPR002645 -
Car01g02799 634 PANTHER SULFATE TRANSPORTER 18 634 IPR001902 GO:0015301|GO:0016020|GO:0055085
Car01g02799 634 TIGRFAM sulP: sulfate permease 74 622 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02799 Car-Chr1 53259167 53266153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02799 1 634 Inorganic Solute Cotransporters AT3G15990 72.129 0.0 969
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02799 K17471 - gmx:100812617 1010.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02799 01 53259167 53266153 Car01g02799 01 53259167 53266153 ECH
Car01g02799 01 53259167 53266153 Car06g02403 06 26461805 26468202 PCT