Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02797 ATGGATGAGGACTTTGAGAATGATCCAATTGAATATGATATTAGTTACCCTCACCCCAAAGGTTATGCTAATCTCAAACGTCCTTTGAGAAATTCTCCGTTTTCTCAATCACTTGCAAATCAATCTGCCAAAGATTTTAatgatgatgatgacatggaggaagatgatggcgatgaagatgatgataatgaAAATACACAGAAAAGTAATGCCATGAAGATTGATGATGAATTACAGTGGATCCCAATAAGGAAAAAGTTGAAGCGTTTGATGGCATCCTTCAAATTTGCAGATCCTAACCACCCTGTCAATGATGATGAGGTTGAAGAGTGGTTTGAGAGGAGAAATGAAGGTTTTGATGATAATGACTATAAGCCGAAAAGTCATGACATGGAGACTGAAAAAGAATTAGAGTGGCAATCAGAAAAGAATAAGTTGAAGAGTTGGATTTCAACCTATGAATTTGCAGCTCAGGAGCCAACACAATCAACTTCAGCTCCTAAACTATCTTTTGGGGTTAGGAGCTCCTTTATTGATCACTGGACTGATGAGGAGACACTTATTCTTCTTGATGTGTGGGGTAATCAGTTTATTCTAAATGAAAGGAAGAGTCTTCGATTCGAGGAATGGAAACAAGTTGCAGGAACGGTATCAGAACTTTCAAATGTTGAAAAGACAGTAACTCAGTGTAGAAATCGTGTCGATACATTGAAGAAAAAGTACAAAAAGGACAAGATTAAGTTTGAAGAAACTGGTAGTCTTGATGGAAAATGTGTTTATTTTAAAAAGATGGATAGGCTAATGTCTACTGTCTCCACTCCACCACAACAAGCAAATCAGTTGGATGACATGAAGAATAGTCCTCCGAATACAGAAGCCATCAGTGTGGAAGGTTTAGAAGGGTCTCGCGGAAAGAAAATAAGCGAAGTAAAGGGCTGTACTGATGAGCCTTCTTCCTTTAAATTACTTGCTGATTTCATTCTGAAACTCGGTGTAATATATGAGAAGATGGAAAATGAAAAATGGCAGCAGATTGTGGAACTTGAAAAGCTGAGGATGAATTTCCTTAATGATATGGAAACAAGAAGGAGGCAGAATTTCCAAAGATTGATAAATGAGATTTTGAAACTAGTGCAGATGGATGGTAAGAATGAAGATTCAGCTAAGAATTTAGAAGGATTGCAAAGTGAGATTTTGAAACTAGTACAGATGGATGGTAAGAATGAAGATTCAGCTAAGAATTTAGAAGGATTGCAAAGTGAGATTTTGAAACTAGTACAGATGGATGGTAAGAATGAAGATTCAGCTAAGAATTTAGAAGGATTGCAAAGTGAGATTTTGAAACTAGTGCAGATGGATCATAAGAATGAAGGTTCAGCTAAGCATGATGGTTCTGCTAAGTCTGAACCCCCAGCTCCATTTCCACGCCCCATCTCCGGCCTCCGCGACACATATATCCATTTTCGTGCTCTTCATCTCCTAAGCTTTCATTTGAACCGAATAAATCAACTTTTGAAGCAACTTCGTGGTCAACCCATTTTCTTCCCTTCCCGGTTTAATGCAAAAACAAAACAAAAGCCATATTATCAACAACTTTCAGTCTGA 1605 0.3651 MDEDFENDPIEYDISYPHPKGYANLKRPLRNSPFSQSLANQSAKDFNDDDDMEEDDGDEDDDNENTQKSNAMKIDDELQWIPIRKKLKRLMASFKFADPNHPVNDDEVEEWFERRNEGFDDNDYKPKSHDMETEKELEWQSEKNKLKSWISTYEFAAQEPTQSTSAPKLSFGVRSSFIDHWTDEETLILLDVWGNQFILNERKSLRFEEWKQVAGTVSELSNVEKTVTQCRNRVDTLKKKYKKDKIKFEETGSLDGKCVYFKKMDRLMSTVSTPPQQANQLDDMKNSPPNTEAISVEGLEGSRGKKISEVKGCTDEPSSFKLLADFILKLGVIYEKMENEKWQQIVELEKLRMNFLNDMETRRRQNFQRLINEILKLVQMDGKNEDSAKNLEGLQSEILKLVQMDGKNEDSAKNLEGLQSEILKLVQMDGKNEDSAKNLEGLQSEILKLVQMDHKNEGSAKHDGSAKSEPPAPFPRPISGLRDTYIHFRALHLLSFHLNRINQLLKQLRGQPIFFPSRFNAKTKQKPYYQQLSV 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02797 534 PANTHER OS01G0718900 PROTEIN 41 390 - -
Car01g02797 534 Pfam Myb/SANT-like DNA-binding domain 179 267 IPR044822 -
Car01g02797 534 Coils Coil 220 240 - -
Car01g02797 534 MobiDBLite consensus disorder prediction 1 73 - -
Car01g02797 534 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 41 390 IPR044823 -
Car01g02797 534 MobiDBLite consensus disorder prediction 29 43 - -
Car01g02797 534 MobiDBLite consensus disorder prediction 47 63 - -
Car01g02797 534 MobiDBLite consensus disorder prediction 456 476 - -
Car01g02797 534 Coils Coil 334 354 - -
Car01g02797 534 Gene3D - 181 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02797 Car-Chr1 53237009 53241919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02797 320 390 Trihelix Transcription Factor Family AT3G14180 39.437 5.29e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Car01g02797 Myb_DNA-bind_4 5.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02797 - - cam:101503981 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02797 01 53237009 53241919 Car01g02797 01 53237009 53241919 ECH