Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02794 ATGCCAAATAAACTTCAGAAAACCCTTCAAGATTACCTCAACAAAATCAAATACAAAAACCCTCACCCTCAAATTAAATTAACCAAAATGCTATCTGGTTGCAAACATCCTAAGACACCATCCTTTTCCCTAGAAAACGGCAGAACATCTAACCACGTTAACGTTAACGTTAACGTCGACGATGCAGCCACTTTAGCTGACGTTGACCGTTTTCTCTTCGAGAATTTCAAGTCTCTGTATTTCAAAGACGATGAAGAAACAGAAAACAACACCAACAAAAACATAAGAATCTCCGAAAATGAAGAACCACAAAAACTCGATTCCTTTTTGTTCGAATCGCCAAGGCTTATCACAACACCACGACCAGATCTTTGTCGATCCACGCGATTCTTCATGAAACCAGGAAATTCAGGATCGTTGATGGAAGATGCTTTATCTCTAACAAACAGTGATGAAGGTGGTTCAAGCAATTCGAATTCATCATCAACAGCATCACCTTCAAAGGAAGCTATTATCGTTAACGATCATTCATCACAATCACTTCCTGAAAATTGCGTTGCTCTGTTAACGTATTCGCCAAGTCCTTACGATGATTTCAGGCGATCAATGCAAGATGTGGTGGAATCGAAATACGGTAACATCGAAAACAATCAAAGCAAAATTGATTGGGATTTCATGGAGGAAATTTTGTTTTGTTACCTTAAACTTAATGAAAAGAAGTCTCATAAGTTTATTTTAAGTGCTTTTGTTGATCTCATCACTGTTATGCGACGGAATTTGGAGGCAGCTCCGGCGAAGCCGTGCAGCGTTCGAACTGTTAGGATTGGGAGGGAGGTGGTGAGGAAGAAAAAGACTAAGCAATTTACCATACAATTTGAGTCTTCGTAA 888 0.3919 MPNKLQKTLQDYLNKIKYKNPHPQIKLTKMLSGCKHPKTPSFSLENGRTSNHVNVNVNVDDAATLADVDRFLFENFKSLYFKDDEETENNTNKNIRISENEEPQKLDSFLFESPRLITTPRPDLCRSTRFFMKPGNSGSLMEDALSLTNSDEGGSSNSNSSSTASPSKEAIIVNDHSSQSLPENCVALLTYSPSPYDDFRRSMQDVVESKYGNIENNQSKIDWDFMEEILFCYLKLNEKKSHKFILSAFVDLITVMRRNLEAAPAKPCSVRTVRIGREVVRKKKTKQFTIQFESS 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02794 295 PANTHER TRANSCRIPTION REPRESSOR OFP14 3 271 - -
Car01g02794 295 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 271 IPR038933 GO:0045892
Car01g02794 295 Pfam Transcriptional repressor, ovate 192 254 IPR006458 -
Car01g02794 295 MobiDBLite consensus disorder prediction 141 167 - -
Car01g02794 295 ProSiteProfiles OVATE domain profile. 188 255 IPR006458 -
Car01g02794 295 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 186 255 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02794 Car-Chr1 53215555 53216814 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Car01g02794 Ovate 3.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02794 - - lja:Lj3g3v0160750.1 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02794 01 53215555 53216814 Car01g02794 01 53215555 53216814 ECH
Car01g02794 01 53215555 53216814 Car06g02407 06 26518796 26519623 PCT