Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02788 ATGAACGGGGGAGGGAGACAGGGACTTAGATCTAGTGGTGCTACCGGCGTCCACCACCACCGTCAGTACTCTGATAACTTCCTCGACGGCGCCTCCACCGGTAACAGATGGCTCCAATCTGCCGGCCTTCAACATCTCCAATCCAATCCCCTCCAGGATTATAATTTGTACGGCGGCGGAGCGCAGGGAGGGAGAATGTATAGGAATGCTCAGAGAAGCTATAACGGAGGAGGGAGTGATTATTATATGGAACCTTCCTCGCCGCCTGATGCTTACCGTGCCTCGACTCATAAGATGAACGGTGAAGACTCAACCGGTGATTTCAGCCCTGGCTTGTTGGATCTGCATTCATTTGACACTGAACTTCTTCCTGAGATGCCAGCCTCCAATGCATATGAGTCTAGTTCTCTGTATCAACCTATCCGGGGTAGAAGAAGCTTTGATGACTCTGAACCTTACATGATGGGCAAACAGACTGCTAAAGCTCGTGCTCCTGACAACACATTGAAAAGTTTACCTGCTGACAAAGAGAAGTCTAGTTCTGTGGCAAAGATTAAAGTTGTGGTTCGTAAGAGACCATTGAATAAGAAAGAACTAGCAAAGAATGAGGAAGACATTATAGAGACATATGCCAATTCTTTAACAGTGCACGAAACTAAACTGAAGGTTGACTTAACTCAGTACTTAGAGAAGCATGAATTTGTTTTTGATGCTGTCTTGAATGAAGAGGTTACGAATGATGAGGTGTATCGTGAAACAGTGGAACCCATTGTTCCAATCATCTTTGAACGCACTAAGGCAACTTGCTTTGCTTACGGGCAAACAGGAAGTGGAAAAACGTATACAATGAAGCCATTGCCGCTTAAAGCATCAAGGGACATCCTAAGATTGATGCATCATACATACCGGAACCAAGGATTTCAGTTGTTCGTGAGCTTCTTTGAAATATATGGCGGGAAGCTCTATGATCTCCTTAATGAGAGAAAAAAGCTTTGCATGAGGGAGGATGGTAAGCAGCAAGTTTGCATTGTTGGCTTGCAAGAGTACCGAGTAGCAGATGTGGAGAACATCAAAGAACTGATCGAGAGAGGTAGTGCCACAAGAAGTACAGGAACAACGGGTGCGAATGAAGAATCCTCACGGTCTCACGCAATACTTCAACTTGCTATCAAGAGGTCAGTTGATGGCAATGAATCCAAACCTCCTCGACTTGTTGGCAAGCTCTCCTTCATAGATCTTGCTGGAAGTGAACGAGGAGCGGATACCACTGACAATGACAAACAGACAAGAATAGAAGGGGCTGAAATCAATAAGAGCTTACTCGCCCTTAAGGAATGCATAAGAGCTCTTGATAATGACCAAGGACACATCCCTTTCAGGGGAAGTAAACTGACTGAAGTTTTGAGGGATTCTTTTGTTGGCAATTCCCGCACTGTTATGATATCATGCATATCTCCAAGCTCTGGTTCATGTGAGCACACTCTGAATACATTAAGATATGCAGACAGGGTGAAAAGCTTATCGAAAGGCAACAACTCAAAGAAGGATGTTCTATCTTCAAATTTCAACCTTAAAGAATCAATTACAGTTCCCTTATCTTCTGTTACTGCACCGGCCTATGAGGATCACACAGCTGATGCATGGCATGATGAAAATGAAGGAGATGATTTTAGCCCCCCTGAAGAGTACTATGAGCAGGTTAAACCATCGTTGAAGAAAAATGGAAGGATGGATTCATATGCAATGACAGATGAAAGATTGAAGAAACCTAGTGGTCTGGTCAAATGGAAGGACCTCCCAAGAGTTGAACCTAAAATCACTAATCCAGAGGATGATTTAAGTGCCCTTTTACAGGAAGAAGAGGATCTTGTAAATGCTCACCGAACACAAGTAGAGGAGACCATGAATATTGTTAAAGAGGAGATGAATCTCTTAGTCGAAGCGGATCAACCGGGAAATCAGTTGGACGATTACGTAACAAGACTAAATGCCATTCTTTCTCAGAAGGCTGCTGGCATTCTGCAGTTGCAAAACCGTTTAGCTCATTTCCAGAAACGTTTAAAGGAGCATAATGTTTTGGTTTCATCCACTGGTTACTAG 2100 0.4376 MNGGGRQGLRSSGATGVHHHRQYSDNFLDGASTGNRWLQSAGLQHLQSNPLQDYNLYGGGAQGGRMYRNAQRSYNGGGSDYYMEPSSPPDAYRASTHKMNGEDSTGDFSPGLLDLHSFDTELLPEMPASNAYESSSLYQPIRGRRSFDDSEPYMMGKQTAKARAPDNTLKSLPADKEKSSSVAKIKVVVRKRPLNKKELAKNEEDIIETYANSLTVHETKLKVDLTQYLEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFERTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMHHTYRNQGFQLFVSFFEIYGGKLYDLLNERKKLCMREDGKQQVCIVGLQEYRVADVENIKELIERGSATRSTGTTGANEESSRSHAILQLAIKRSVDGNESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNSKKDVLSSNFNLKESITVPLSSVTAPAYEDHTADAWHDENEGDDFSPPEEYYEQVKPSLKKNGRMDSYAMTDERLKKPSGLVKWKDLPRVEPKITNPEDDLSALLQEEEDLVNAHRTQVEETMNIVKEEMNLLVEADQPGNQLDDYVTRLNAILSQKAAGILQLQNRLAHFQKRLKEHNVLVSSTGY 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02788 699 CDD KISc_KIF2_like 184 505 - -
Car01g02788 699 ProSiteProfiles Kinesin motor domain profile. 184 507 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g02788 699 PRINTS Kinesin heavy chain signature 264 285 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g02788 699 PRINTS Kinesin heavy chain signature 373 390 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g02788 699 PRINTS Kinesin heavy chain signature 407 425 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g02788 699 PRINTS Kinesin heavy chain signature 457 478 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g02788 699 SMART kinesin_4 182 513 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g02788 699 Coils Coil 673 693 - -
Car01g02788 699 Gene3D Kinesin motor domain 159 510 IPR036961 -
Car01g02788 699 PANTHER KINESIN-RELATED PROTEIN 6 4 699 - -
Car01g02788 699 PANTHER KINESIN-LIKE PROTEIN KIN-13B 4 699 - -
Car01g02788 699 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 507 IPR027417 -
Car01g02788 699 Pfam Kinesin motor domain 190 506 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g02788 699 ProSitePatterns Kinesin motor domain signature. 406 417 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02788 Car-Chr1 53165704 53170864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02788 184 507 Calmodulin-binding Proteins AT5G65930 35.329 2.24e-45 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02788 K10393 - gmx:100799100 1221.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02788 01 53165704 53170864 Car01g02788 01 53165704 53170864 ECH