Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02786 ATGGGTAAGGGAACCGGAAGTTTTGGTAAGAGGAGGAACAAGACTCACACTCTCTGTATCAGGTGTGGCCGCCGCAGTTTCCACCTCCAGAAAAGTCGATGCTCAGCATGCGCTTACCCCGCTGCTCGTGTCAGGAAATatAACTGGAGTGTTAAGGCAATTCGCAGAAAGACCACTGGAACTGGTAGGATGAGGTATTTGCGTCATGTTCCTCGCCGATTCAAGAGTGGCTTCAGAGAGGGAACTGAAGCTGCACCTAGGAAGAAGGGAGGAGCTGCAACTGCTTAA 288 0.5104 MGKGTGSFGKRRNKTHTLCIRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRKKGGAATA 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02786 95 SUPERFAMILY Zn-binding ribosomal proteins 1 55 IPR011332 GO:0006412
Car01g02786 95 Pfam Ribosomal protein L37e 3 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Car01g02786 95 ProSitePatterns Ribosomal protein L37e signature. 4 23 IPR018267 GO:0003735|GO:0005840|GO:0006412
Car01g02786 95 PANTHER 60S RIBOSOMAL PROTEIN L37 1 92 - -
Car01g02786 95 Gene3D - 1 87 IPR011331 GO:0003735|GO:0005840|GO:0006412
Car01g02786 95 PANTHER RIBOSOMAL PROTEIN L37 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02786 Car-Chr1 53157806 53158861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02786 1 95 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 86.316 8.03e-57 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02786 K02922 - qsu:112017435 192.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02786 01 53157806 53158861 Car01g02786 01 53157806 53158861 ECH