Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02771 ATGATGGCTGGAAACCCTAACTGGTGGAGCATGCATCCACCACCATCTTTGAATATACCTTCTCAATATGTTCTTGGATCTTCTTCAATCCCTTTTAATTCCTTAACGGAAAATTCAGAAACTCCTCACTCATGGAGTCAACTACTTTTCACTGGATTACCTGGAGAAGAAGAGAGGGTAGGTTTCAATCATTTTGAAGCTAATAAAAGTTCAGAAAATTGGGATGTTCAAATTATGAATCCATGTTCAAGAGTTTCTCCTAATACTATTATGGATGTAATAAAGCAAGAAGTTTGTCAAAGTGGGAATATGTATGGAGAAGATCAGTTtcatcatcatcatcatcatcatcatgcttcatcatcTGGATTAATTGGCTCTTCTAATTGGTCTCATATGGTTCCTGTTTCTTCACCAATTTCTACTTCTCATGTCACTAGCTTAAGTAGTAGTAGTGACAATATGTTGGATTTCACTTATAATAAGGTAGATCATAGGAACAACAATCCACTACCTACAGATCAAATATCTGAGTGTAATAGTTCAACTATTGGAGTTAATAAGAAGGCTAGGGTTCAGCCATCTTCAAGCCAACCACCTCTAAAGGTGAGGAAGGAGAAGCTAGGTGATAGAATAACAGCACTTCACCAACTAGTTTCTCCATTTGGAAAGACTGACACTGCTTCTGTCTTGTTAGAAGCCATTGGATACATCAGGTTCCTCCAGAGTCAAATTGAGGCACTGAGCTCTCCTTACTTGGACACTGCATCAAAAAACATGAGGAATCAACATTCTGTGCATGTAGAAAGAAATTCTGTTTTTCCTGAGGACCCCGGTCAGCTGTTGGATGACACTGGCCTAAAAAGAAAGGGTGCTCCAAACCAGAATGCAGAAGGTAACAAGGCAAAGGACTTGAGGAGTAGAGGGTTGTGCTTGGTACCTGTGTCATGCACACAAAATGTTGGAAGTGAAAATGGAGCTGATTATTGGGCACCAGCATTTGGAAGTGGATTTTAA 1017 0.3825 MMAGNPNWWSMHPPPSLNIPSQYVLGSSSIPFNSLTENSETPHSWSQLLFTGLPGEEERVGFNHFEANKSSENWDVQIMNPCSRVSPNTIMDVIKQEVCQSGNMYGEDQFHHHHHHHHASSSGLIGSSNWSHMVPVSSPISTSHVTSLSSSSDNMLDFTYNKVDHRNNNPLPTDQISECNSSTIGVNKKARVQPSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSSPYLDTASKNMRNQHSVHVERNSVFPEDPGQLLDDTGLKRKGAPNQNAEGNKAKDLRSRGLCLVPVSCTQNVGSENGADYWAPAFGSGF 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02771 338 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 192 241 IPR011598 GO:0046983
Car01g02771 338 CDD bHLH_AtbHLH_like 202 249 IPR045239 -
Car01g02771 338 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 11 325 - -
Car01g02771 338 Gene3D - 202 267 IPR036638 GO:0046983
Car01g02771 338 MobiDBLite consensus disorder prediction 274 301 - -
Car01g02771 338 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 202 253 IPR036638 GO:0046983
Car01g02771 338 PANTHER OS05G0228400 PROTEIN 11 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02771 Car-Chr1 53066970 53070779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02771 1 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 38.636 3.71e-45 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02771 - - gmx:100802121 424.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02771 01 53066970 53070779 Car01g02771 01 53066970 53070779 ECH