Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02762 ATGGCTCGCATATCATTTGGAGACTTTGAGGATTCTTTCAGTTCCAGCTCTATTAGGGCATATATTGCTGAGTTCATCTCAACCTTACTCTTTGTTTTTGCTGGTGTTGGTTCTACTAGAGCCTTTGATAAGTTGACATCAGATGCAGCACTTGATCCAGCTGGGTTATTATCAAttgctgtatgtcatggttttgctctctttgttgctgtttctgttgGAGCTAACATTTCTGGTGGCCATGTCAATCCAGCTGTCACCTTTGGAATGGCTCTTGGTGGACAAATCACCATCCTCACTTCTCTCTTCTATTGTATTGCACAGTTTCTTGGCTCCATAGCTGCATGCTTACTCCTCAAGTTTGTAACTGGAAGCTTGACAAATATTCCAATCCATAGCAtaggtgcaggtgttggagttggagaaggagtagTAACAGAGATAGTGATAACATTTGGATTGGTGTATACAGTGTATGCAACAGCAGCTGATCCAAAGAAAGGGTCATTAGGAACAATAGCACCAATAGCAATTGGTTTAAGTGTTGGTGCAAACATATTAGCTGCAGGTCCATTCTCAGGTGGTTCAATGAATCCAGCACGTTCATTTGGACCAGCAGTTGTTAGTGGTGATTTTCATGACAATTGGATATATTGGGTTGGTCCTCTTATTGGTGGTGGTTTGGCTGGTCTTATCTATACTCATCTCTTCATTCCATCAAAACATCAACAACCTATGCCCAAGTGA 747 0.3708 MARISFGDFEDSFSSSSIRAYIAEFISTLLFVFAGVGSTRAFDKLTSDAALDPAGLLSIAVCHGFALFVAVSVGANISGGHVNPAVTFGMALGGQITILTSLFYCIAQFLGSIAACLLLKFVTGSLTNIPIHSIGAGVGVGEGVVTEIVITFGLVYTVYATAADPKKGSLGTIAPIAIGLSVGANILAAGPFSGGSMNPARSFGPAVVSGDFHDNWIYWVGPLIGGGLAGLIYTHLFIPSKHQQPMPK 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02762 248 CDD MIP 19 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car01g02762 248 PANTHER MIP PROTEIN 1 246 - -
Car01g02762 248 TIGRFAM MIP: MIP family channel proteins 23 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car01g02762 248 Gene3D Glycerol uptake facilitator protein. 2 248 IPR023271 -
Car01g02762 248 SUPERFAMILY Aquaporin-like 13 244 IPR023271 -
Car01g02762 248 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Car01g02762 248 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car01g02762 248 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car01g02762 248 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car01g02762 248 PRINTS Major intrinsic protein family signature 146 164 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car01g02762 248 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car01g02762 248 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car01g02762 248 Pfam Major intrinsic protein 14 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car01g02762 248 PANTHER AQUAPORIN-8 1 246 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02762 Car-Chr1 52997810 52999335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02762 1 246 Major Intrinsic Protein MIP AT3G16240 75.203 8.03e-130 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02762 K09873 - gmx:100817754 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02762 01 52997810 52999335 Car01g02762 01 52997810 52999335 ECH