Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02758 ATGCCTTCCCTTTTGGTCGTTCTATGCAATTGTGTTCTCATTTTCTTGGCTGCTGTCACCACTACTGTTGAAGCTTCAAGGCAATTCCAAGTTGGTGATCACCTTGGTTGGCGTGTTCCTGATCAGAACAACACTGCTTTTTATACACAATGGGCTCAAACTAACAGATTCCAAATTGGAGATTCTCTCGTATTTGTGTACCAGAATGATTCACTTCTTACTGTTGAAAAATATGATTACTTTAACTGTGACACTACTGAACCAATCACTACTTTCACCAATGGAAAGAGCACTCTTAACCTTGACAGATCTGGTGCTTTCTACTTCATCAGTGGAACTCTTGATCATTGCAACCATGGCCAAAAATTGCTTGTTGAAGTTATGGCACCACATCCAATTCCAGCACTATCTCCACCACCCACCATTTCAATTCCACCTCAAGTTTCCATCTCACCAGCAATGGCTCCTTCACCTTATTCTTCTGAATCTGATACCATACAGACTGCTTCATCCTCCGCAATCGTCTTTACTTCAAGTTTTGTGTCTACTTTTGTCACAGTTGTTGTCATGATGATGTTTGCACTCTAA 588 0.4099 MPSLLVVLCNCVLIFLAAVTTTVEASRQFQVGDHLGWRVPDQNNTAFYTQWAQTNRFQIGDSLVFVYQNDSLLTVEKYDYFNCDTTEPITTFTNGKSTLNLDRSGAFYFISGTLDHCNHGQKLLVEVMAPHPIPALSPPPTISIPPQVSISPAMAPSPYSSESDTIQTASSSAIVFTSSFVSTFVTVVVMMMFAL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02758 195 SUPERFAMILY Cupredoxins 26 128 IPR008972 -
Car01g02758 195 Pfam Plastocyanin-like domain 42 121 IPR003245 GO:0009055
Car01g02758 195 ProSiteProfiles Phytocyanin domain profile. 27 129 IPR003245 GO:0009055
Car01g02758 195 CDD OsENODL1_like 27 128 IPR041846 -
Car01g02758 195 Gene3D - 26 134 IPR008972 -
Car01g02758 195 PANTHER BLUE COPPER PROTEIN 12 190 IPR039391 GO:0009055
Car01g02758 195 PANTHER EARLY NODULIN-LIKE PROTEIN 2 12 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02758 Car-Chr1 52965119 52965951 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02758 3 143 Phytocyanin Superfamily AT1G79800 48.951 1.44e-47 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02758 - - qsu:112010402 176.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02758 01 52965119 52965951 Car01g02758 01 52965119 52965951 ECH