Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02741 ATGATTATGTCGTTAGGTTTTGATGCATCCCCTCGCACTGCGTCCTCAGAAAAAATCCACCCTTTGTTTCTTTTGGTTGCGTTTATTGTAGCAACGAGAGACAATGGGATTAAGAAGTACCCAAGCAAAGTAATCAAGAAGGACTCTGCAAAGAAGACAGCAAAGAAATCTAGGGTTAAAGCTTTCGTGAAGCTTGTCAATTATCAGCACTTGATGCCCACACGTTATACCCTTGATGTGGATCTGAAAGATGCTGTTTCTGTCGATGTTCTTCAAGCCAAGGACAAGAAGGTGACAGCCCTTAAGGAGACAAAGAAGCGCTTTGAGGAGAGGTTTAAGACTGGCAAGAACAGGCAGCCTTCTTGCTTCAATTTAATGACATGTGAGGTGTTTAACTGCTCGTAA 405 0.4272 MIMSLGFDASPRTASSEKIHPLFLLVAFIVATRDNGIKKYPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVSVDVLQAKDKKVTALKETKKRFEERFKTGKNRQPSCFNLMTCEVFNCS 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02741 134 Gene3D - 27 123 IPR038655 -
Car01g02741 134 PANTHER 60S RIBOSOMAL PROTEIN L27 35 123 - -
Car01g02741 134 Coils Coil 91 111 - -
Car01g02741 134 PANTHER 60S RIBOSOMAL PROTEIN L27 35 123 IPR001141 GO:0003735|GO:0005840|GO:0006412
Car01g02741 134 Pfam Ribosomal L27e protein family 43 118 IPR001141 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02741 Car-Chr1 52780317 52783353 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02741 36 118 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 80.723 1.21e-43 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02741 K02901 - gmx:100793982 139.813